Pseudomonas stutzeri TS44 |
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Putative Pseudomonas stutzeri TS44 RM systems
Ref: Li,X. et al. J. Bacteriol. 194 (16), 4473-4474 (2012)
REBASE ref # 14782
GenBank #: AJXE00000000
REBASE acronym: PstTS44
Org_num: 9238
All begin YO5_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4409 | 184 aa hypothetical protein | |||
| 4414 | M | restriction modification system DNA specificity | M.PstTS44ORF4414P | |
| 4419 | S | S.PstPheN2ORF3700P (30% identity) | S.PstTS44ORF4414P | |
| 4439 | TetR family transcriptional regulator | |||
| 14426 | 376 aa hypothetical protein | |||
| 14431 | M | M.Pst55ORF18855P (95% identity) | M.PstTS44ORF14431P | |
| 14436 | S | S1.PaeNP1ORF3610P (61% identity) | S.PstTS44ORF14431P | |
| 14441 | 315 aa hypothetical protein | |||
| 14446 | 166 aa hypothetical protein | |||
| 14451 | 228 aa hypothetical protein | |||
| 14456 | R | Pae097ORF11845P (97% identity) | PstTS44ORF14431P | |
| 14860 | DNA gyrase subunit B | |||
| 14865 | M | type I restriction-modification system, M | M.PstTS44ORF14865P | |
| 14870 | S | S.PsytsORFHP (56% identity) | S.PstTS44ORF14865P | |
| 14875 | 294 aa hypothetical protein | |||
| 14880 | R | Pae84ORF25P (96% identity) | PstTS44ORF14865P | |
| 14885 | 236 aa hypothetical protein | |||
| 1086 | IS3 family transposase | |||
| 1091 | R | type I restriction-modification enzyme, R | PstTS44ORF1091P | |
| 1096 | 78 aa hypothetical protein | |||
| 14910 | 244 aa hypothetical protein | |||
| 14915 | R | PtoSM2ORF11600P (99% identity) | PstTS44ORF14910P | |
| 14920 | 499 aa hypothetical protein | |||
| 14940 | 410 aa hypothetical protein | |||
| 14945 | S | S.PaePA83II (35% identity) | S1.PstTS44ORF14955P | |
| 14950 | 76 aa hypothetical protein | |||
| 14955 | M | M.Psp3919ORF20910P (97% identity) | M.PstTS44ORF14955P | |
| 14960 | S | S2.Ssp0042ORF670P (83% identity) | S2.PstTS44ORF14955P | |
| 14965 | SinR-like protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13433 | Superfamily II DNA/RNA helicase, SNF2 family | |||
| 13438 | RM | PpuBORFBP (82% identity) | PstTS44ORF13438P | |
| 13443 | chromosome segregation SMC protein | |||
| 1639 | 222 aa hypothetical protein | |||
| 1644 | M | DNA methylase N-4/N-6 domain-containing protein | GGATCC | M.PstTS44ORF1644P |
| 475 | 220 aa hypothetical protein | |||
| 480 | M | M.Pps5344ORF1977P (46% identity) | M.PstTS44ORF480P | |
| 485 | 185 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19397 | SAM-dependent methyltransferase | |||
| 19402 | R | PmiR19MrrP (74% identity) | PstTS44MrrP | |
| 19407 | acyl-CoA dehydrogenase domain-containing | |||