Escherichia coli DEC15E |
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Putative Escherichia coli DEC15E RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIHS00000000
REBASE acronym: EcoDEC15E
Org_num: 9063
All begin ECDEC15E_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5341 | phage integrase family protein | |||
| 5342 | R | Ecos4422ORF22930P (100% identity) | EcoDEC15EORF5344P | |
| 5343 | S | S.Ecos4422ORF22930P (100% identity) | S.EcoDEC15EORF5344P | |
| ??? | M | M.EcoDEC15DORF4984P (100% identity) | M.EcoDEC15EORF5344P | |
| 5346 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 953 | phage/conjugal plasmid C-4 type zinc finger, | |||
| 954 | M | M.KpnRKPORF17480P (100% identity) | GATC | M.EcoDEC15EORF954P |
| 955 | bacteriophage replication protein | |||
| 1154 | antitermination family protein | |||
| 1155 | M | M.SsoCS14ORF10750P (100% identity) | A | M.EcoDEC15EORF1155P |
| 1144 | 140 aa hypothetical protein | |||
| 1145 | M | M.EcoDEC15DORF868P (100% identity) | M.EcoDEC15EORF1145P | |
| 1146 | 84 aa hypothetical protein | |||
| 2610 | DNA mismatch endonuclease of the very short | |||
| 2611 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoDEC15EORF2611P |
| 2612 | HD domain protein | |||
| 2609 | carboxylate/Amino Acid/Amine Transporter family | |||
| 2610 | V | V.SsoSE61DcmP (100% identity) | V.EcoDEC15EDcmP | |
| 2611 | cytosine-specific methyltransferase | |||
| 4028 | fis transcriptional dual regulator | |||
| 4029 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.EcoDEC15EORF4029P |
| 4030 | 37 aa hypothetical protein | |||
| 4148 | ribulose-phosphate 3-epimerase | |||
| 4149 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC15EDamP |
| 4150 | cell division protein DamX | |||
| 4857 | 40 aa hypothetical protein | |||
| 4858 | M | M.SflFF38ORF15P (100% identity) | GGCC | M.EcoDEC15EORF4858P |
| 4859 | 329 aa hypothetical protein | |||
| 5301 | modification methylase AvaI | |||
| 5302 | R | EcoM1D1ORF4353P (100% identity) | CYCGRG | EcoDEC15EORF5302P |
| 5303 | 97 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1533 | protein ninB | |||
| 1534 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoDEC15EORF1534P |
| 1535 | bacteriophage Lambda NinG family protein | |||