Escherichia coli DEC12A |
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Putative Escherichia coli DEC12A RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIHA00000000
REBASE acronym: EcoDEC12A
Org_num: 9080
All begin ECDEC12A_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18 | integrase core domain protein | |||
| 19 | R | EcoS7380ORFEP (100% identity) | EcoDEC12AORF22P | |
| ??? | S | S.EcoO111ORFAP (99% identity) | S.EcoDEC12AORF22P | |
| 22 | M | M.SflN110ORF19045P (100% identity) | M.EcoDEC12AORF22P | |
| 23 | restriction methylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25 | mcrC | |||
| 26 | R | SflSTLE4ORF19250P (100% identity) | EcoDEC12AORF26P | |
| 27 | 326 aa hypothetical protein | |||
| 967 | protein ninB | |||
| 968 | M | M.EcoS7380ORFIP (94% identity) | GATC | M.EcoDEC12AORF968P |
| 969 | bacteriophage Lambda NinG family protein | |||
| 1406 | 65 aa hypothetical protein | |||
| 1407 | M | M.EcoDEC12EORF951P (100% identity) | M.EcoDEC12AORF1407P | |
| 1764 | 620 aa hypothetical protein | |||
| 1768 | M | M.EcoDEC12EORF951P (100% identity) | M.EcoDEC12AORF1768P | |
| 1769 | 94 aa hypothetical protein | |||
| 2369 | 306 aa hypothetical protein | |||
| 2370 | V | V.SflFF59DcmP (100% identity) | V.EcoDEC12ADcmP | |
| 2371 | M | M.EcoS7380DcmP (100% identity) | CCWGG | M.EcoDEC12ADcmP |
| 2372 | 231 aa hypothetical protein | |||
| 2586 | 44 aa hypothetical protein | |||
| 2587 | M | M.EcoSO40ORF23900P (100% identity) | GATC | M.EcoDEC12AORF2587P |
| 2588 | 129 aa hypothetical protein | |||
| 2675 | 95 aa hypothetical protein | |||
| 2678 | M | M.EcoS6995ORFAP (100% identity) | M.EcoDEC12AORF2678P | |
| 2679 | 65 aa hypothetical protein | |||
| 3205 | ribosome-associated inhibitor A | |||
| 3206 | M | M.SenYU39ORF1896P (100% identity) | M.EcoDEC12AORF3206P | |
| 3207 | TM2 domain protein | |||
| 3634 | phage integrase family protein | |||
| 3635 | M | M.EcoS7380ORFCP (100% identity) | M.EcoDEC12AORF3635P | |
| 3636 | 553 aa hypothetical protein | |||
| 4032 | DNA-binding protein fis | |||
| 4033 | M | M.EcoS7380ORFAP (100% identity) | ATGCAT | M.EcoDEC12AORF4033P |
| 4034 | 37 aa hypothetical protein | |||
| 4155 | ribulose-phosphate 3-epimerase | |||
| 4156 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC12ADamP |
| 4157 | protein damX | |||
| 4969 | 83 aa hypothetical protein | |||
| 4970 | M | M.EcoS7380ORFJP (100% identity) | GATC | M.EcoDEC12AORF4970P |
| 4971 | crossover junction endodeoxyribonuclease rusA | |||
| 5335 | phage DNA methyltransferase | |||
| 5336 | M | DNA methylase family protein | M.EcoDEC12AORF5334P | |
| 5340 | 617 aa hypothetical protein | |||
| 5416 | 116 aa hypothetical protein | |||
| 5417 | M | M.EcoC9111ORF6064P (100% identity) | M.EcoDEC12AORF5417P | |
| 5418 | 53 aa hypothetical protein | |||
| 5456 | recombination-associated protein rdgC | |||
| 5457 | M | M.EcoC9111ORF6027P (100% identity) | M.EcoDEC12AORF5457P | |
| 5458 | tRNA synthetases class I (E and Q), anti-codon | |||
| 5727 | lexA DNA binding domain protein | |||
| 5728 | M | M.EcoSO40ORF27175P (100% identity) | GATC | M.EcoDEC12AORF5728P |
| 5729 | 83 aa hypothetical protein | |||
| 5756 | membrane protein | |||
| 5759 | M | M.EcoS7438ORFNP (100% identity) | M.EcoDEC12AORF5759P | |
| 5760 | 94 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23 | restriction methylase | |||
| 24 | R | SflSTLE4McrBP (100% identity) | EcoDEC12AMcrBP | |
| 25 | R | SflSTLE4McrCP (100% identity) | EcoDEC12AMcrCP | |
| 26 | restriction endonuclease | |||