Escherichia coli DEC7E |
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Putative Escherichia coli DEC7E RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIGE00000000
REBASE acronym: EcoDEC7E
Org_num: 9057
All begin ECDEC7E_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5093 | 71 aa hypothetical protein | |||
| 5094 | M | M.EcoR31ORF22360P (100% identity) | M.EcoDEC7EORF5094P | |
| 5095 | S | S.EcoR31ORF22360P (100% identity) | S.EcoDEC7EORF5094P | |
| 5096 | 42 aa hypothetical protein | |||
| 5097 | R | EcoR31ORF22360P (100% identity) | EcoDEC7EORF5094P | |
| 5098 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 291 | recombination-associated protein rdgC | |||
| 292 | M | M.EcoDEC7DORF464P (99% identity) | M.EcoDEC7EORF292P | |
| 295 | SPFH domain / Band 7 family protein | |||
| 1228 | ybl17 | |||
| 1229 | M | M.Sbo812ORFAP (100% identity) | GATC | M.EcoDEC7EORF1229P |
| 1230 | exonuclease | |||
| 2168 | 306 aa hypothetical protein | |||
| 2169 | V | V.SflSTLE3DcmP (100% identity) | V.EcoDEC7EDcmP | |
| 2170 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoDEC7EDcmP |
| 2171 | 142 aa hypothetical protein | |||
| 3708 | DNA-binding protein fis | |||
| 3709 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoDEC7EORF3709P |
| 3710 | 37 aa hypothetical protein | |||
| 3841 | ribulose-phosphate 3-epimerase | |||
| 3842 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoDEC7EDamP |
| 3843 | protein damX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1280 | membrane protein | |||
| 1281 | R | EcoteDMcrBP (91% identity) | EcoDEC7EMcrBP | |
| 1282 | R | EmaE2C08McrCP (100% identity) | EcoDEC7EMcrCP | |
| 1283 | isocitrate dehydrogenase domain protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2998 | bacteriophage replication protein | |||
| 2999 | M | M.EcoTX1999ORF3129P (100% identity) | GATC | M.EcoDEC7EORF2999P |
| 3000 | phage/conjugal plasmid C-4 type zinc finger, | |||