Escherichia coli DEC5E |
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Putative Escherichia coli DEC5E RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIFU00000000
REBASE acronym: EcoDEC5E
Org_num: 9044
All begin ECDEC5E_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19 | protein ninB | |||
| 20 | M | M.Eph2012ORF32P (100% identity) | GATC | M.EcoDEC5EORF20P |
| 21 | antirepressor protein | |||
| 446 | ybl17 | |||
| 447 | M | M.Sbo812ORFAP (100% identity) | GATC | M.EcoDEC5EORF447P |
| 448 | 53 aa hypothetical protein | |||
| 1280 | 65 aa hypothetical protein | |||
| 1281 | M | M.EcoR37ORF29110P (100% identity) | A | M.EcoDEC5EORF1281P |
| 1284 | membrane protein | |||
| 1419 | yfcA protein | |||
| 1420 | M | M.EcoTB182AORF25840P (100% identity) | M.EcoDEC5EORF1420P | |
| 1421 | 61 aa hypothetical protein | |||
| 2325 | 306 aa hypothetical protein | |||
| 2326 | V | V.EcosPA8DcmP (100% identity) | V.EcoDEC5EDcmP | |
| 2327 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoDEC5EDcmP |
| 2328 | 231 aa hypothetical protein | |||
| 3206 | VRR-NUC domain protein | |||
| 3207 | M | M.EcoR37ORF1720P (99% identity) | M.EcoDEC5EORF3207P | |
| 3208 | phage protein | |||
| 3246 | yfcA protein | |||
| 3247 | M | M.Xca80ORFEP (100% identity) | M.EcoDEC5EORF3247P | |
| 3248 | 41 aa hypothetical protein | |||
| 4046 | DNA-binding protein fis | |||
| 4047 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoDEC5EORF4047P |
| 4048 | 37 aa hypothetical protein | |||
| 4164 | ribulose-phosphate 3-epimerase | |||
| 4165 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC5EDamP |
| 4166 | protein damX | |||
| 5191 | 103 aa hypothetical protein | |||
| ??? | V | V.Kpn22265ORF23705P (99% identity) | V.EcoDEC5EORF5192P | |
| 5192 | M | M.KquU41ORF24735P (100% identity) | GCGCGC | M.EcoDEC5EORF5192P |
| 5193 | R | Mmo12289ORF1444P (100% identity) | GCGCGC | EcoDEC5EORF5192P |
| 5194 | 79 aa hypothetical protein | |||
| 5350 | histidine kinase-, DNA gyrase B-, and HSP90-like | |||
| ??? | M | M.Sen5773ORF4471P (98% identity) | RCCGGY | M.EcoDEC5EORF5351P |
| 5352 | 98 aa hypothetical protein | |||
| 5423 | 60 aa hypothetical protein | |||
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoDEC5EORF5424P |
| 5425 | M | M1.EcoR37ORF20055P (100% identity) | GGTCTC | M2.EcoDEC5EORF5424P |
| ??? | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoDEC5EORF5424P |
| 5427 | 5-methylcytosine specificity | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | hypothetical protein | |||
| 5427 | R | EcosS9McrCP (100% identity) | EcoDEC5EMcrCP | |
| 5428 | R | EcosS3McrBP (100% identity) | EcoDEC5EMcrBP | |
| 5429 | 48 aa hypothetical protein | |||