Thermus species RL |
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Putative Thermus species RL RM systems
Ref: Dwivedi,V. et al. J. Bacteriol. 194 (13), 3534 (2012)
REBASE ref # 14583
Contig set: 2,036,600 bp
GenBank #: AIJQ00000000 (NZ_AIJQ00000000)
REBASE acronym: TspRL
Org_num: 8983
All begin RLTM_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10343 | restriction modification system DNA specificity | |||
| 10348 | R | TpaRLORF1805P (99% identity) | TspRLORF10343P | |
| 10353 | 108 aa hypothetical protein | |||
| 9888 | 487 aa hypothetical protein | |||
| 9893 | M | M.TpaRLORF1805P (100% identity) | M.TspRLORF9893P | |
| 9898 | 186 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8834 | 2-amino-3-ketobutyrate CoA ligase | |||
| 8839 | M | M.TpaRLI (100% identity) | TCGA | M.TspRLORF8839P |
| ??? | R | TpaRLIP (100% identity) | TCGA | TspRLORF8839P |
| 8844 | 127 aa hypothetical protein | |||
| 3576 | ribosomal large subunit pseudouridine synthase | |||
| 3581 | M | M.Tth16ORF408P (100% identity) | CTCGAG | M.TspRLORF3581P |
| 3586 | 166 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1790 | 189 aa hypothetical protein | |||
| 1795 | R | TthAA22ORF3150P (100% identity) | GMGAGC | TspRLORF1800P |
| 1800 | M | M.TpaRLIII (100% identity) | GMGAGC | M.TspRLORF1800P |
| 1805 | 120 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7663 | two-component response regulator | |||
| 7678 | R | TpaRLMrrP (100% identity) | TspRLMrrP | |
| 7693 | iron-sulfur protein | |||