Alistipes finegoldii DSM 17242 |
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Putative Alistipes finegoldii DSM 17242 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 16383
Complete sequence: 3,734,239 bp
GenBank #: CP003274
REBASE acronym: Afi17242
Org_num: 8959
All begin Alfi_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 574 | site-specific recombinase XerD | |||
| 575 | S | S1.BegC20ORF3098P (95% identity) | S1.Afi17242ORF581P | |
| 576 | S | S4.Pvu191ORF6480P (50% identity) | S2.Afi17242ORF581P | |
| 577 | S | S2.Bfr481ORF9620P (88% identity) | S3.Afi17242ORF581P | |
| 578 | transposase | |||
| 579 | S | S1.Pme0695I (69% identity) | S4.Afi17242ORF581P | |
| 580 | virulence protein | |||
| 581 | M | M.Pvu191ORF6480P (100% identity) | M.Afi17242ORF581P | |
| 582 | T5orf172 domain-containing protein | |||
| 583 | R | Pvu191ORF6480P (100% identity) | Afi17242ORF581P | |
| 584 | plasmid maintenance system antidote protein | |||
| 709 | type I restriction-modification system | |||
| 710 | S | S.AspGH6ORF2190P (58% identity) | S.Afi17242ORF709P | |
| 711 | R | AspGH6ORF2190P (93% identity) | Afi17242ORF709P | |
| 712 | Plasmid recombination enzyme | |||
| 1803 | hypothetical protein | |||
| 1804 | M | M.Asp3BBH6ORF8370P (100% identity) | M.Afi17242ORF1804P | |
| 1805 | S | S3.Asp3BBH6ORF8370P (100% identity) | S1.Afi17242ORF1804P | |
| 1806 | S | S2.Asp3BBH6ORF8370P (33% identity) | S2.Afi17242ORF1804P | |
| 1807 | transposase | |||
| 1808 | S | S2.Asp3BBH6ORF8370P (39% identity) | S3.Afi17242ORF1804P | |
| 1809 | site-specific recombinase XerD | |||
| 1810 | S | S2.AspFAH4ORF8660P (55% identity) | S4.Afi17242ORF1804P | |
| 1811 | FRG domain protein | |||
| 1811 | FRG domain protein | |||
| 1812 | R | Asp3BBH6ORF8370P (100% identity) | Afi17242ORF1812P | |
| 1813 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 193 | 75 aa hypothetical protein | |||
| 194 | M | M.AfiCE91ORF10150P (98% identity) | M.Afi17242ORF194P | |
| 195 | transposase | |||
| 828 | 161 aa hypothetical protein | |||
| 829 | M | M.Afi17242ORF194P (97% identity) | M.Afi17242ORF829P | |
| 830 | 75 aa hypothetical protein | |||
| 1856 | 110 aa hypothetical protein | |||
| 1857 | M | M.Afi17242ORF194P (98% identity) | M.Afi17242ORF1857P | |
| 1858 | 34 aa hypothetical protein | |||
| 2694 | 276 aa hypothetical protein | |||
| 2695 | M | M.Fsp1239ORFHP (59% identity) | M.Afi17242ORF2695P | |
| 2696 | 54 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 538 | 162 aa hypothetical protein | |||
| 539 | R | Apu17216MrrP (100% identity) | Afi17242MrrP | |
| 540 | 165 aa hypothetical protein | |||