Escherichia coli DEC1B |
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Putative Escherichia coli DEC1B RM systems
Ref: Rasko,D. et al. unpublished
REBASE ref # 14514
GenBank #: AIEW00000000
REBASE acronym: EcoDEC1B
Org_num: 8928
All begin ECDEC1B_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3511 | 79 aa hypothetical protein | |||
| 3512 | M | M.Sbo49812I (36% identity) | M1.EcoDEC1BORF3512P | |
| 3513 | M | M.EcoO127I (62% identity) | M2.EcoDEC1BORF3512P | |
| 3514 | S | S.EcoO127I (100% identity) | S.EcoDEC1BORF3512P | |
| 3515 | 218 aa hypothetical protein | |||
| 3516 | 355 aa hypothetical protein | |||
| 3517 | R | EcoO127I (100% identity) | EcoDEC1BORF3512P | |
| 3518 | 238 aa hypothetical protein | |||
| 5033 | 180 aa hypothetical protein | |||
| 5034 | R | EcoECB1ORF9045P (100% identity) | EcoDEC1BORF5035P | |
| 5035 | M | M.EcoDEC2DORF4922P (100% identity) | M.EcoDEC1BORF5035P | |
| 5036 | S | DNA-specific restriction modification | S.EcoDEC1BORF5035P | |
| 5037 | 203 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 978 | phage/conjugal plasmid C-4 type zinc finger, | |||
| 979 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.EcoDEC1BORF979P |
| 980 | bacteriophage replication protein | |||
| 2315 | carboxylate/Amino Acid/Amine Transporter family | |||
| 2316 | V | V.EcoDEC2EDcmP (100% identity) | V.EcoDEC1BDcmP | |
| 2317 | M | M.EcoSC477DcmP (100% identity) | CCWGG | M.EcoDEC1BDcmP |
| 2318 | HD domain protein | |||
| 2341 | membrane protein | |||
| 2344 | M | M.EcoS7438ORFNP (100% identity) | M.EcoDEC1BORF2344P | |
| 2345 | 65 aa hypothetical protein | |||
| 3901 | fis transcriptional dual regulator | |||
| 3902 | M | M.EcoS6995ORFBP (100% identity) | ATGCAT | M.EcoDEC1BORF3902P |
| 3903 | 37 aa hypothetical protein | |||
| 4014 | ribulose-phosphate 3-epimerase | |||
| 4015 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoDEC1BDamP |
| 4016 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3582 | helicase conserved C-terminal domain protein | |||
| 3583 | M | M.EcoSCU172ORF3240P (81% identity) | M.EcoDEC1BORF3583P | |
| 5396 | R | EcoSCU172ORF3240P (100% identity) | EcoDEC1BORF5397P | |
| 5397 | M | methylation subunit, type III | M.EcoDEC1BORF5397P | |