Escherichia coli DEC1A |
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Putative Escherichia coli DEC1A RM systems
Ref: Rasko,D. et al. unpublished
REBASE ref # 14514
GenBank #: AIEV00000000
REBASE acronym: EcoDEC1A
Org_num: 8927
All begin ECDEC1A_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1063 | 238 aa hypothetical protein | |||
| 1064 | R | EcoO127I (100% identity) | EcoDEC1AORF1068P | |
| 1065 | 355 aa hypothetical protein | |||
| 1066 | 218 aa hypothetical protein | |||
| ??? | S | S.EcoO127I (100% identity) | S.EcoDEC1AORF1068P | |
| 1068 | M | M.EcoO127I (100% identity) | M.EcoDEC1AORF1068P | |
| 1069 | 79 aa hypothetical protein | |||
| 5042 | 203 aa hypothetical protein | |||
| 5043 | S | S.EcoECB1ORF9045P (94% identity) | S.EcoDEC1AORF5044P | |
| 5044 | M | M.EcoDEC2DORF4922P (100% identity) | M.EcoDEC1AORF5044P | |
| 5045 | R | EcoECB1ORF9045P (99% identity) | EcoDEC1AORF5044P | |
| 5046 | 180 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 882 | phage/conjugal plasmid C-4 type zinc finger, | |||
| 883 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.EcoDEC1AORF883P |
| 884 | bacteriophage replication protein | |||
| 2109 | carboxylate/Amino Acid/Amine Transporter family | |||
| 2110 | V | V.EcoDEC2EDcmP (100% identity) | V.EcoDEC1ADcmP | |
| 2111 | M | M.EcoSC477DcmP (100% identity) | CCWGG | M.EcoDEC1ADcmP |
| 2112 | HD domain protein | |||
| 2178 | membrane protein | |||
| 2181 | M | M.EcoS7438ORFNP (100% identity) | M.EcoDEC1AORF2181P | |
| 2182 | 65 aa hypothetical protein | |||
| 3669 | fis transcriptional dual regulator | |||
| 3670 | M | M.EcoS6995ORFBP (100% identity) | ATGCAT | M.EcoDEC1AORF3670P |
| 3671 | 37 aa hypothetical protein | |||
| 3783 | ribulose-phosphate 3-epimerase | |||
| 3784 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoDEC1ADamP |
| 3785 | sporulation related domain protein | |||
| 4669 | transposase | |||
| 4670 | M | M.EcoDEC1CORF3567P (100% identity) | GATC | M.EcoDEC1AORF4666P |
| 4671 | lexA DNA binding domain protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5091 | helicase conserved C-terminal domain protein | |||
| 5092 | M | M.EcoR71ORF22205P (100% identity) | M.EcoDEC1AORF5092P | |
| 5093 | R | EcoSCU172ORF3240P (100% identity) | EcoDEC1AORF5092P | |
| 5094 | 100 aa hypothetical protein | |||