Vibrio cholerae IEC224 |
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Putative Vibrio cholerae IEC224 RM systems
Ref: Garza,D.R. Jr. et al. unpublished
REBASE ref # 14424
| Sequence length: | GenBank #: | |
| chromosome I: | 3,007,450 bp | CP003330 |
| chromosome II: | 1,072,136 bp | CP003331 |
REBASE acronym: Vch224
Org_num: 8636
All begin O3Y_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 8540 | 706 aa hypothetical protein | |||
| 8545 | R | VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | Vch224ORF8565P |
| 8550 | 663 aa hypothetical protein | |||
| 8555 | 470 aa hypothetical protein | |||
| 8560 | S | S.VspNIH41ORF1746P (99% identity) | AAGNNNNNNCATC | S.Vch224ORF8565P |
| 8565 | M | M.VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | M.Vch224ORF8565P |
| 8570 | 687 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 12570 | ribulose-phosphate 3-epimerase | |||
| 12575 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch224DamP |
| 12580 | DamX protein | |||
| chromosome II | ||||
| 14393 | guanosine 5-monophosphate oxidoreductase | |||
| 14398 | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.Vch224ORF14398P |
| 14403 | 638 aa hypothetical protein | |||
| 15608 | 63 aa hypothetical protein | |||
| 15613 | M | M.VspNIH41ORF3529P (93% identity) | M.Vch224ORF15613P | |
| 15618 | 141 aa hypothetical protein | |||