Escherichia coli O104:H4 11-4404 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O104:H4 11-4404 RM systems
Ref: Grad,Y.H. et al. unpublished
REBASE ref # 14015
GenBank #: AFUX00000000
REBASE acronym: EcoC4404
Org_num: 8491
All begin EUHG_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 251 | endoribonuclease symE | |||
| 252 | S | S.SspS13ORF3945P (100% identity) | S.EcoC4404ORF253P | |
| 253 | M | M.SspS13ORF3945P (100% identity) | M.EcoC4404ORF253P | |
| 254 | R | SspS13ORF3945P (100% identity) | EcoC4404ORF253P | |
| 255 | 550 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4946 | 308 aa hypothetical protein | |||
| 4947 | M | M.Sso3794ORF26595P (100% identity) | SAY | M.EcoC4404ORF4947P |
| 4948 | 73 aa hypothetical protein | |||
| 1364 | rha family phage regulatory protein | |||
| 1365 | R | Sso1099IP (100% identity) | CTGCAG | EcoC4404ORF1366P |
| 1366 | M | M.Sso1099I (100% identity) | CTGCAG | M.EcoC4404ORF1366P |
| 1367 | 237 aa hypothetical protein | |||
| 2488 | 617 aa hypothetical protein | |||
| 2489 | M | M.EcoOS402ORF3850P (100% identity) | A | M.EcoC4404ORF2489P |
| 2490 | 67 aa hypothetical protein | |||
| 2497 | 108 aa hypothetical protein | |||
| 2498 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoC4404ORF2498P |
| 2499 | 162 aa hypothetical protein | |||
| 1744 | 65 aa hypothetical protein | |||
| 1745 | M | M.SsoL4094ORF17545P (100% identity) | A | M.EcoC4404ORF1745P |
| 1746 | anti-adapter protein iraM | |||
| 4103 | ribulose-phosphate 3-epimerase | |||
| 4104 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC4404DamP |
| 4105 | protein damX | |||
| 2604 | carboxylate/Amino Acid/Amine transporter | |||
| 2605 | V | V.SsoSE61DcmP (100% identity) | V.EcoC4404DcmP | |
| 2606 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoC4404DcmP |
| 2607 | 231 aa hypothetical protein | |||
| 3998 | DNA-binding protein fis | |||
| 3999 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.EcoC4404ORF3999P |
| 4000 | 59 aa hypothetical protein | |||
| 1345 | 70 aa hypothetical protein | |||
| 1346 | M | M.Esp10290ORF1290P (100% identity) | GATC | M.EcoC4404ORF1346P |
| 1347 | 143 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3635 | 795 aa hypothetical protein | |||
| 3636 | M | M.Kpn0718ORF815P (100% identity) | ACCACC | M.EcoC4404ORF3636P |
| 3637 | R | Kpn0718ORF815P (99% identity) | ACCACC | EcoC4404ORF3636P |
| 3638 | 97 aa hypothetical protein | |||