Pseudomonas aeruginosa PA7 |
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Putative Pseudomonas aeruginosa PA7 RM systems
Ref: Dodson,R.J. et al. unpublished
REBASE ref # 10210
Complete sequence: 6,588,339 bp
GenBank #: CP000744 (NC_009656)
REBASE acronym: PaePA7
Org_num: 4810
All begin PSPA7_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 74 | site-specific recombinase, phage integrase | |||
| 75 | M | M.Pae973ORF415P (100% identity) | AGANNNNNNNNTCAA | M.PaePA7II |
| 76 | S | S.Pae973ORF415P (100% identity) | AGANNNNNNNNTCAA | S.PaePA7II |
| 77 | R | Pae973ORF415P (100% identity) | AGANNNNNNNNTCAA | PaePA7IIP |
| 78 | C | C.PspBYT5ORF19420P (100% identity) | C.PaePA7IIP | |
| 79 | 196 aa hypothetical protein | |||
| 6043 | 358 aa hypothetical protein | |||
| 6044 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.PaePA7III |
| 6045 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.PaePA7III |
| 6046 | HNH endonuclease | |||
| 6047 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | PaePA7IIIP |
| 6049 | 215 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2373 | 149 aa hypothetical protein | |||
| 2374 | M | M.Pae14912ORFCP (88% identity) | M.PaePA7ORF2374P | |
| 2375 | TIR | |||
| 2375 | TIR | |||
| 2376 | M | M.PaeLo535ORF11730P (98% identity) | M.PaePA7ORF2376P | |
| 2377 | 581 aa hypothetical protein | |||
| 2520 | 715 aa hypothetical protein | |||
| 2521 | M | M.Psp2hnORF10310P (82% identity) | M.PaePA7ORF2521P | |
| 2522 | 70 aa hypothetical protein | |||
| 4451 | nucleoid-associated protein NdpA | |||
| 4452 | M | M.PaesC79ORF28725P (100% identity) | M.PaePA7ORF4452P | |
| 4453 | DNA binding protein | |||
| 5333 | 260 aa hypothetical protein | |||
| 5334 | RM | Paz17556ORFCP (82% identity) | GAGGAC | PaePA7I |
| 6455 | recombinase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5376 | ParA plasmid partitioning protein | |||
| 5377 | R | Pde13867MrrP (61% identity) | PaePA7MrrP | |
| 5378 | addiction module antidote protein, HigA family | |||