Salmonella enterica subsp. enterica serovar Gallinarum/Pullorum RKS5078 |
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Putative Salmonella enterica subsp. enterica serovar Gallinarum/Pullorum RKS5078 RM systems
Ref: Liu,S.-L. and Feng,Y. unpublished
REBASE ref # 13807
Complete sequence: 4,637,962 bp
GenBank #: CP003047
REBASE acronym: Sen5078
Org_num: 7926
All begin SPUL_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4511 | 37 aa hypothetical protein | |||
| 4512 | R | StySBLI (36% identity) | GGYANNNNNNTCG | Sen5078ORF4514P |
| 4513 | S | S.Ssp1806ORF19520P (100% identity) | GGYANNNNNNTCG | S.Sen5078ORF4514P |
| 4514 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen5078ORF4514P |
| ??? | 390 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1877 | 306 aa hypothetical protein | |||
| 1878 | V | V.StyUK1DcmP (100% identity) | V.Sen5078DcmP | |
| 1879 | M | M.Ssp1806DcmP (99% identity) | CCWGG | M.Sen5078DcmP |
| 1880 | 231 aa hypothetical protein | |||
| 3395 | Fis DNA-binding protein | |||
| 3396 | M | M.Ssp1806ORF2265P (100% identity) | ATGCAT | M.Sen5078ORF3396P |
| 3397 | 54 aa hypothetical protein | |||
| 4096 | DamX protein | |||
| 4097 | M | M.StyTDamP (100% identity) | GATC | M.Sen5078DamP |
| 4098 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2613 | terminal oxidase subunit I | |||
| 2614 | R | Sen3707ORF14455P (100% identity) | CAGAG | Sen5078ORF2615P |
| 2615 | M | M.SenCY16ORF16870P (100% identity) | CAGAG | M.Sen5078ORF2615P |
| 2616 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4514 | Type I restriction-modification system | |||
| ??? | R | SenSG9MrrP (100% identity) | Sen5078MrrP | |
| 4515 | 44 aa hypothetical protein | |||