Leuconostoc mesenteroides subsp. mesenteroides J18 |
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Putative Leuconostoc mesenteroides subsp. mesenteroides J18 RM systems
Ref: Jung,J.Y. and Jeon,C.O. unpublished
REBASE ref # 13816
| Sequence length: | GenBank #: | |
| Chromosome: | 1,900,740 bp | CP003101 |
| plasmid pKLE01: | 37,252 bp | CP003102 |
| plasmid pKLE04: | 19,293 bp | CP003105 |
REBASE acronym: LmeJ18
Org_num: 7896
All begin MI1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6805 | trigger factor | |||
| 6800 | R | LmeJ18ORF10250P (100% identity) | LmeJ18ORF6800P | |
| 10150 | M | M.LmeJ18ORF10250P (100% identity) | M.LmeJ18ORF6800P | |
| 10155 | S | S2.LmeJ18ORF10250P (52% identity) | S1.LmeJ18ORF6800P | |
| 6780 | pseudogene | |||
| 10160 | pseudogene | |||
| 10165 | S | S2.Lme211ORF7030P (48% identity) | S2.LmeJ18ORF6800P | |
| 6770 | ATP-dependent protease | |||
| 10250 | pseudogene | |||
| 4735 | M | M.Lme211ORF4990P (100% identity) | M.LmeJ18ORF4735P | |
| 4740 | 578 aa hypothetical protein | |||
| ??? | S | S.Lme211ORF4990P (98% identity) | S.LmeJ18ORF4735P | |
| 4750 | 255 aa hypothetical protein | |||
| 4975 | 70 aa hypothetical protein | |||
| 4980 | S | S.LmeMGORF945P (100% identity) | S.LmeJ18ORF4980P | |
| ??? | R | 297 aa hypothetical protein | LmeJ18ORF4980P | |
| 4995 | peptidase | |||
| 6770 | ATP-dependent Clp protease ATP-binding subunit | |||
| 10160 | S | S2.Lme211ORF7030P (52% identity) | S1.LmeJ18ORF10250P | |
| 6780 | integrase | |||
| 10735 | S | S1.Lme211ORF7030P (95% identity) | S2.LmeJ18ORF10250P | |
| 10740 | 71 aa hypothetical protein | |||
| 10745 | S | restriction endonuclease subunit S | S3.LmeJ18ORF10250P | |
| 10150 | M | M.LmeJ18ORF6800P (100% identity) | M.LmeJ18ORF10250P | |
| 6800 | R | LmeJ18ORF6800P (100% identity) | LmeJ18ORF10250P | |
| 6805 | trigger factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pKLE01 | ||||
| 9376 | DNA invertase Pin | |||
| 9381 | R | Lme211ORF9680P (100% identity) | GATC | LmeJ18ORF9386P |
| 9386 | M | M.Lme211ORF9680P (100% identity) | GATC | M.LmeJ18ORF9386P |
| 9391 | replication and copy control-associated protein | |||
| plasmid pKLE04 | ||||
| 9951 | RepB protein | |||
| 9946 | S | S.Lme211ORF10370P (100% identity) | S.LmeJ18ORF9941P | |
| 10695 | RM | Lme211ORF10370P (100% identity) | LmeJ18ORF9941P | |
| 9936 | ArsR family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4710 | 369 aa hypothetical protein | |||
| ??? | R | LciC10McrBP (66% identity) | LmeJ18McrBP | |
| 10725 | 90 aa hypothetical protein | |||