Helicobacter canadensis MIT 98-5491 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Helicobacter canadensis MIT 98-5491 RM systems
Ref: Loman,N.J. et al. J. Bacteriol. 191 (17), 5566-5567 (2009)
REBASE ref # 13800
Complete sequence: 1,623,845 bp
GenBank #: CM000776
REBASE acronym: Hca5491
Org_num: 7995
All begin HCAN_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 526 | GTP-binding protein EngA | |||
| 527 | R | Hca13221IVP (100% identity) | Hca5491ORF530P | |
| 528 | S | S.Hca1348ORFCP (99% identity) | S.Hca5491ORF530P | |
| 529 | anticodon nuclease | |||
| 530 | M | M.Hca1348ORFCP (100% identity) | M.Hca5491ORF530P | |
| 531 | 158 aa hypothetical protein | |||
| 1357 | 325 aa hypothetical protein | |||
| 1358 | M | M.Hca1348ORFEP (100% identity) | M.Hca5491ORF1358P | |
| 1359 | conserved virulence protein | |||
| 1360 | S | S.Hca13221III (99% identity) | S.Hca5491ORF1358P | |
| 1361 | predicted helicase | |||
| 1362 | pseudogene | |||
| 1363 | R | Hca1348ORFEP (100% identity) | Hca5491ORF1358P | |
| 1364 | 282 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 754 | cystathionine gamma-lyase | |||
| 755 | RM | Hca1348ORFBP (100% identity) | Hca5491ORF755P | |
| 756 | 82 aa conserved hypothetical protein | |||
| 933 | 170 aa conserved hypothetical protein | |||
| 934 | M | M.Cco22096ORF4775P (85% identity) | CCTC | M.Hca5491ORF934P |
| 935 | R | Hca1348ORFJP (98% identity) | CCTC | Hca5491ORF934P |
| 936 | 200 aa hypothetical protein | |||
| 1229 | GMP synthase | |||
| 1230 | M | M.Hca1348ORFFP (100% identity) | CCNGG | M.Hca5491ORF1230P |
| 1231 | R | Hca1348ORFFP (100% identity) | CCNGG | Hca5491ORF1230P |
| 1232 | 261 aa conserved hypothetical protein | |||
| 1231 | 340 aa conserved hypothetical protein | |||
| 1232 | RM | Hca1348ORFGP (100% identity) | Hca5491ORF1232P | |
| 1233 | 566 aa conserved hypothetical protein | |||
| 1457 | adenylosuccinate lyase | |||
| 1458 | M | M.Hca1348ORFAP (84% identity) | GANTC | M.Hca5491ORF1458P |
| 1459 | 135 aa conserved hypothetical protein | |||
| 1547 | isocitrate dehydrogenase | |||
| 1548 | R | Hca1348ORFHP (85% identity) | GCGC | Hca5491ORF1549P |
| 1549 | M | M.Hca1348ORFHP (98% identity) | GCGC | M.Hca5491ORF1549P |
| 1550 | argininosuccinate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 700 | 479 aa conserved hypothetical protein | |||
| 701 | M | M.Hca1348ORFDP (100% identity) | M.Hca5491ORF701P | |
| 702 | 507 aa hypothetical protein | |||
| 703 | 331 aa conserved hypothetical protein | |||
| 704 | R | Hca1348ORFDP (100% identity) | Hca5491ORF701P | |
| 705 | esterase | |||