Escherichia coli XH140A |
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Putative Escherichia coli XH140A RM systems
Ref: Yang,H.L. et al. unpublished
REBASE ref # 13592
GenBank #: AFVX00000000
REBASE acronym: Eco140A
Org_num: 7838
All begin IAE_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10239 | endoribonuclease SymE | |||
| 10244 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco140AORF10249P |
| 10249 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco140AORF10249P |
| ??? | R | Msa17ORFC2P (100% identity) | AACNNNNNNGTGC | Eco140AORF10249P |
| 10259 | methylated adenine and cytosine restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9122 | ribulose-phosphate 3-epimerase | |||
| 9127 | M | DNA adenine methylase | GATC | M.Eco140ADamP |
| 9132 | cell division protein DamX | |||
| 15282 | global DNA-binding transcriptional dual | |||
| 15287 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco140AORF15287P |
| 15292 | 59 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10224 | DEAD-box helicase-like protein | |||
| 10229 | R | SenHNK130McrCP (100% identity) | Eco140AMcrCP | |
| 10234 | R | SenHNK130McrBP (100% identity) | Eco140AMcrBP | |
| 10239 | endoribonuclease SymE | |||
| ??? | endonuclease R Type I restriction enzyme | |||
| 10259 | R | SenHNK130MrrP (100% identity) | Eco140AMrrP | |
| 10264 | GTP-binding protein YjiA | |||