Oscillibacter valericigenes Sjm18-20 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Oscillibacter valericigenes Sjm18-20 RM systems
Ref: Katano,Y. et al. unpublished
REBASE ref # 15684
Complete sequence: 4,410,036 bp
GenBank #: AP012044
REBASE acronym: Ova1820
Org_num: 7825
All begin OBV_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1890 | 127 aa hypothetical protein | |||
| 1900 | M | M.Fpl113805ORF19270P (46% identity) | M.Ova1820ORF1900P | |
| 1920 | 164 aa hypothetical protein | |||
| 8820 | 122 aa hypothetical protein | |||
| 8830 | M | M.CspCPB2ORF14645P (40% identity) | M.Ova1820ORF8830P | |
| 8840 | 200 aa hypothetical protein | |||
| 8930 | 240 aa hypothetical protein | |||
| 8940 | M | M.OspGH1ORFAP (75% identity) | M.Ova1820ORF8940P | |
| 8950 | 103 aa hypothetical protein | |||
| 19970 | 201 aa hypothetical protein | |||
| 19980 | M | M.PmeBin122ORFFP (45% identity) | M.Ova1820ORF19980P | |
| 19990 | terminase small subunit | |||
| 30030 | 385 aa hypothetical protein | |||
| 30040 | M | M.PspC3ORF13115P (44% identity) | M.Ova1820ORF30040P | |
| 30050 | 140 aa hypothetical protein | |||
| 30310 | 71 aa hypothetical protein | |||
| 30320 | R | PmeBin541ORFEP (75% identity) | GGATCC | Ova1820ORF30340P |
| 30330 | C | C.PmeBin541ORFEP (50% identity) | C.Ova1820ORF30340P | |
| 30340 | M | M.PmeBin541ORFEP (66% identity) | GGATCC | M.Ova1820ORF30340P |
| 30360 | site-specific recombinase | |||
| 32470 | 77 aa hypothetical protein | |||
| 32480 | M | M.CbaBL6ORF2151P (95% identity) | CTSAG | M.Ova1820ORF32470P |
| 32490 | 287 aa hypothetical protein | |||
| 41620 | 246 aa hypothetical protein | |||
| 41630 | M | M.Oba18003ORF13440P (86% identity) | GGCC | M1.Ova1820ORF41630P |
| 41640 | M | M.Lba902ORFHP (88% identity) | M2.Ova1820ORF41630P | |
| 41650 | 147 aa hypothetical protein | |||
| 41870 | 5-methylcytosine-specific restriction | |||
| 41880 | M | M2.PflMS82ORF3875P (43% identity) | M1.Ova1820ORF41880P | |
| 41890 | M | M1.Bte262aORF17680P (45% identity) | M2.Ova1820ORF41880P | |
| 41900 | AlpA family transcriptional regulator | |||
| 42630 | 89 aa hypothetical protein | |||
| 42640 | M | M.CspW14AORF10560P (83% identity) | M.Ova1820ORF42640P | |
| 42650 | 188 aa hypothetical protein | |||
| 42890 | 148 aa hypothetical protein | |||
| 42900 | M | M.Csp7D4C2ORF14810P (89% identity) | M.Ova1820ORF42900P | |
| 42910 | 67 aa hypothetical protein | |||
| 43040 | transposase | |||
| 43050 | M | M.GanSD1ORF2335P (57% identity) | GGGAC | M1.Ova1820ORF43050P |
| 43060 | RM | GanSD1ORF2335P (44% identity) | GGGAC | Ova1820ORF43050P |
| 43070 | M | M.TonNAORF1383P (9% identity) | GGGAC | M2.Ova1820ORF43050P |
| 43080 | 192 aa hypothetical protein | |||
| 45010 | 143 aa hypothetical protein | |||
| 45020 | M | M.CklORF3897P (94% identity) | M.Ova1820ORF45020P | |
| 45030 | 168 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9140 | 114 aa hypothetical protein | |||
| 9150 | M | M.LdeBORF1230P (43% identity) | M.Ova1820ORF9150P | |
| 9160 | 51 aa hypothetical protein | |||
| 9170 | R | Csp12ORFDP (94% identity) | Ova1820ORF9150P | |
| 9180 | 224 aa hypothetical protein | |||
| 34110 | 387 aa hypothetical protein | |||
| 34120 | R | Ova1820ORF9150P (25% identity) | Ova1820ORF34120P | |
| 34140 | 292 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30730 | DNA mismatch endonuclease | |||
| 30740 | R | Bli101AMcrBP (12% identity) | Ova1820ORF30740P | |
| 30750 | 58 aa hypothetical protein | |||
| 41850 | 627 aa hypothetical protein | |||
| 41860 | R | SspNJN17McrCP (31% identity) | Ova1820McrCP | |
| 41870 | R | LfuSWB9McrBP (34% identity) | Ova1820McrBP | |
| 41880 | methyltransferase | |||