Lactobacillus salivarius NIAS840 |
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Putative Lactobacillus salivarius NIAS840 RM systems
Ref: Ham,J.S. et al. J. Bacteriol. 193 (19), 5551-5552 (2011)
REBASE ref # 13461
GenBank #: AFMN00000000
REBASE acronym: Lsa840
Org_num: 7473
All begin NIAS840_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 148 | coproporphyrinogen III oxidase of BS | |||
| 150 | S | S1.LsaLPM01ORFAP (52% identity) | S.Lsa840ORF150P | |
| 151 | R | LsaGJ24ORF105P (98% identity) | Lsa840ORF150P | |
| 153 | restriction endonuclease S subunit | |||
| 329 | 448 aa hypothetical protein | |||
| 330 | R | Lsacp400ORF12091P (99% identity) | Lsa840ORF332P | |
| 331 | S | S.LsaGJ24ORF656P (64% identity) | S.Lsa840ORF332P | |
| 332 | M | M.LsaGJ24ORF656P (97% identity) | M.Lsa840ORF332P | |
| 333 | 103 aa hypothetical protein | |||
| 1785 | oligopeptide ABC transporter, periplasmic | |||
| 1786 | R | LsaZLp4bORFIP (98% identity) | Lsa840ORF1791P | |
| 1787 | S | S2.Lsa006ORF9830P (50% identity) | S1.Lsa840ORF1791P | |
| 1788 | tyrosine recombinase XerC | |||
| 1789 | S | S1.Lsa006ORF9830P (51% identity) | S2.Lsa840ORF1791P | |
| 1790 | S | S3.Lsa006ORF9830P (99% identity) | S3.Lsa840ORF1791P | |
| 1791 | M | M1.Lsa006ORF9830P (99% identity) | M1.Lsa840ORF1791P | |
| 1792 | M | M.LsaZLp4bORFHP (99% identity) | M2.Lsa840ORF1791P | |
| 1793 | S | S.Lsacp400ORF421P (98% identity) | S4.Lsa840ORF1791P | |
| 1794 | membrane protein | |||
| 1868 | integrase | |||
| 1869 | S | S.LsaSNK6ORF8675P (100% identity) | S.Lsa840ORF1870P | |
| 1870 | M | M.Lsa212ORF8580P (98% identity) | M.Lsa840ORF1870P | |
| 1871 | 46 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16 | 361 aa hypothetical protein | |||
| 17 | R | R1.Lin6629ORF6250P (31% identity) | R1.Lsa840ORF19P | |
| 18 | R | R2.Msp0966ORF8440P (15% identity) | R2.Lsa840ORF19P | |
| 19 | M | M1.Aro10801ORF909P (57% identity) | CCTC | M.Lsa840ORF19P |
| 20 | 555 aa hypothetical protein | |||
| 850 | xaa-His dipeptidase | |||
| 851 | M | M.Lsa3154ORF449P (96% identity) | M.Lsa840ORF851P | |
| 852 | type II restriction endonuclease | |||
| 851 | type II restriction endonuclease | |||
| 852 | RM | Lsa3154ORF449AP (100% identity) | Lsa840ORF852P | |
| 853 | type II restriction endonuclease | |||
| 852 | type II restriction endonuclease | |||
| 853 | RM | Lsa3154ORF449BP (98% identity) | Lsa840ORF853P | |
| 854 | 94 aa hypothetical protein | |||
| 1875 | type II restriction enzyme, methylase subunit | |||
| 1876 | RM | Lsa51ORF9084BP (100% identity) | Lsa840ORF1876P | |
| 1877 | type II restriction enzyme, methylase subunit | |||
| 1876 | type II restriction enzyme, methylase subunit | |||
| 1877 | RM | LsaCEA3ORF9530BP (63% identity) | Lsa840ORF1877P | |
| 1878 | DNA helicase, restriction/modification system | |||
| 1874 | 238 aa hypothetical protein | |||
| 1875 | RM | Lsa51ORF9084AP (99% identity) | Lsa840ORF1875P | |
| 1876 | type II restriction enzyme, methylase subunit | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1685 | 226 aa hypothetical protein | |||
| 1686 | R | Sdy444ORF1635P (80% identity) | Lsa840ORF1687P | |
| 1687 | M | M2.Lsa840ORF1687P (61% identity) | M1.Lsa840ORF1687P | |
| 1688 | M | M.SauWB43SORF18P (62% identity) | M2.Lsa840ORF1687P | |
| 1689 | 118 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 328 | 308 aa hypothetical protein | |||
| 329 | R | M.PspHS6ORF11475P (3% identity) | Lsa840McrBP | |
| 330 | type I restriction-modification system, | |||
| 333 | 103 aa hypothetical protein | |||
| 334 | R | LsaCEA3MrrP (97% identity) | Lsa840MrrP | |
| 335 | RNA methyltransferase, TrmA family | |||
| 1350 | alpha-galactosidase | |||
| 1351 | R | LsaAR809ORF4895P (34% identity) | Lsa840ORF1351P | |
| 1352 | guanine-hypoxanthine permease | |||
| 424 | inosine-5-monophosphate dehydrogenase | |||
| 425 | R | LsaSGL03ORF410P (99% identity) | Lsa840ORF425P | |
| 426 | protein tyrosine phosphatase | |||