Geobacter uraniumreducens Rf4 |
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Putative Geobacter uraniumreducens Rf4 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10111
Complete sequence: 5,136,364 bp
GenBank #: CP000698 (NC_009483)
REBASE acronym: GurR
Org_num: 4769
All begin Gura_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 546 | 266 aa hypothetical protein | |||
| 547 | R | Sxi6416ORF4465P (60% identity) | GurRORF548P | |
| 548 | M | M.FauTH167ORF7725P (83% identity) | M.GurRORF548P | |
| 549 | S | S.MmiET2ORF2419P (42% identity) | S.GurRORF548P | |
| 550 | 537 aa hypothetical protein | |||
| 1024 | sigma-54 specific transcriptional regulator, Fis | |||
| 1025 | R | Bce842ORF4160P (69% identity) | GurRORF1026P | |
| 1026 | M | M.Dph13687ORF2540P (76% identity) | M.GurRORF1026P | |
| 1027 | S | S.Bce842ORF4160P (42% identity) | S.GurRORF1026P | |
| 1028 | 83 aa hypothetical protein | |||
| 1479 | transcriptional modulator of MazE/toxin, MazF | |||
| 1480 | M | M.GspHR1ORF10465P (83% identity) | M.GurRORF1480P | |
| 1481 | S | S.Ssp21906ORF1122P (56% identity) | S.GurRORF1480P | |
| 1482 | R | GspHR1ORF10465P (86% identity) | GurRORF1480P | |
| 1483 | Peptidoglycan-binding domain 1 protein | |||
| 2094 | 60 aa hypothetical protein | |||
| 2095 | M | M.Bth15426ORF4975P (59% identity) | M.GurRORF2095P | |
| 2096 | 130 aa hypothetical protein | |||
| 2097 | S | S.CceTL2ORF18125P (50% identity) | S.GurRORF2095P | |
| 2098 | prevent-host-death family protein | |||
| 2099 | addiction module toxin, RelE/StbE family | |||
| ??? | R | EnaZM001ORF7600P (34% identity) | GurRORF2095P | |
| 2102 | 85 aa hypothetical protein | |||
| 3961 | Radical SAM domain protein | |||
| 3962 | S | S1.GhaSAP1ORF12455P (56% identity) | S.GurRORF3962P | |
| 3963 | cell filamentation protein Fic | |||
| 4036 | protein of unknown function DUF45 | |||
| 4037 | R | NspDNFORF1172P (82% identity) | GurRORF4043P | |
| 4038 | 168 aa hypothetical protein | |||
| 4039 | helix-turn-helix domain protein | |||
| 4040 | 473 aa hypothetical protein | |||
| 4041 | 579 aa hypothetical protein | |||
| 4042 | S | S.Dsp392ORF6190P (29% identity) | S.GurRORF4043P | |
| 4043 | M | M.NspDNFORF1172P (80% identity) | M.GurRORF4043P | |
| 4044 | Uncharacterized protein-like protein | |||
| 4300 | transcriptional regulator | |||
| 4301 | R | CmeDORF116060P (46% identity) | GurRORF4301P | |
| 4302 | 3-deoxy-D-arabinoheptulosonate-7-phosphate | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1722 | cation diffusion facilitator family transporter | |||
| 1723 | RM | GloIAEORF195P (50% identity) | GurRORF1723P | |
| 1724 | DUF1016 family protein | |||
| 2470 | DNA polymerase, beta domain protein region | |||
| 2472 | M | M.RspIH1DndAP (53% identity) | M.GurRDndAP | |
| 2473 | 358 aa hypothetical protein | |||
| 2472 | aminotransferase, class V | |||
| 2473 | M | M.GspRG29DndBP (60% identity) | M.GurRDndBP | |
| 2474 | 3-phosphoadenosine 5-phosphosulfate | |||
| 2473 | 358 aa hypothetical protein | |||
| 2474 | M | M.Csp4101DndCP (46% identity) | M.GurRDndCP | |
| 2475 | 658 aa hypothetical protein | |||
| 2474 | 3-phosphoadenosine 5-phosphosulfate | |||
| 2475 | M | M.Ami6DndDP (40% identity) | M.GurRDndDP | |
| 2476 | 132 aa hypothetical protein | |||
| 2475 | 658 aa hypothetical protein | |||
| 2476 | M | 132 aa hypothetical protein | M.GurRDndEP | |
| 2477 | 390 aa hypothetical protein | |||
| 3273 | dTDP-glucose 4,6-dehydratase | |||
| 3274 | R | Mgi3017ORF3660P (35% identity) | GGTACC | GurRORF3275P |
| 3275 | M | M.DacSJ4ORF1251P (29% identity) | GGTACC | M.GurRORF3275P |
| 3276 | Organic solvent tolerance protein | |||
| 3598 | death-on-curing family protein | |||
| 3599 | S | M.Asp7108ORFCP (13% identity) | S.GurRORF3599P | |
| 3600 | M | M.DprORF2450P (75% identity) | M.GurRORF3599P | |
| 3601 | restriction endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 592 | helicase domain protein | |||
| 593 | M | M.GsuOSK2AORF34500P (63% identity) | M.GurRORF593P | |
| 594 | R | GsuOSK2AORF34500P (88% identity) | GurRORF593P | |
| 595 | PilT protein domain protein | |||
| 2738 | transcriptional regulator | |||
| 2739 | R | IbaHL53ORF2548P (63% identity) | GurRORF2740P | |
| 2740 | M | M.AspMex14ORF5450P (78% identity) | M.GurRORF2740P | |
| 2741 | 559 aa hypothetical protein | |||
| 4388 | helix-turn-helix domain protein | |||
| 4389 | R | GloIAEORF14920P (82% identity) | GurRORF4390P | |
| 4390 | M | M.TspKTORF10020P (59% identity) | M.GurRORF4390P | |
| 4391 | 159 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3600 | N-6 DNA methylase | |||
| 3601 | R | SynJA2MrrP (51% identity) | GurRMrrP | |
| 3602 | helix-turn-helix domain protein | |||
| 4113 | transcriptional regulator | |||
| 4114 | R | 186 aa hypothetical protein | GurRMcrBAP | |
| 4115 | transposase, IS204/IS1001/IS1096/IS1165 family | |||
| 4116 | R | 454 aa hypothetical protein | GurRMcrBBP | |
| 4117 | 785 aa conserved hypothetical protein | |||