Shewanella putrefaciens CN-32 |
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Putative Shewanella putrefaciens CN-32 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10102
Complete sequence: 4,659,220 bp
GenBank #: CP000681 (NC_009438)
REBASE acronym: SpuCN
Org_num: 4761
All begin Sputcn32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 153 | site-specific recombinase, phage integrase | |||
| 154 | M | M.VvuB2ORFDP (37% identity) | M.SpuCNORF154P | |
| 155 | AAA ATPase | |||
| 156 | protein of unknown function DUF45 | |||
| 157 | R | Spu681ORF2265P (100% identity) | SpuCNORF161P | |
| 158 | KAP P-loop domain protein | |||
| 159 | deoxyguanosinetriphosphate | |||
| 160 | S | S.Spu681ORF2265P (100% identity) | S.SpuCNORF161P | |
| 161 | M | M.Spu681ORF2265P (100% identity) | M.SpuCNORF161P | |
| 162 | 204 aa conserved hypothetical protein | |||
| 2907 | protein of unknown function UPF0150 | |||
| 2908 | M | M.Spu681ORF8725P (100% identity) | M.SpuCNORF2908P | |
| 2909 | S | S.Spu681ORF8725P (100% identity) | S.SpuCNORF2908P | |
| 2910 | ATPase associated with various cellular | |||
| 2911 | 435 aa conserved hypothetical protein | |||
| 2912 | R | Spu681ORF8725P (100% identity) | SpuCNORF2908P | |
| 2913 | transcriptional regulator, XRE family | |||
| 3522 | phage transcriptional regulator, AlpA | |||
| 3523 | R | Spu4MORF18250P (99% identity) | SpuCNORF3524P | |
| 3524 | M | M.Spu681ORF5580P (100% identity) | M.SpuCNORF3524P | |
| 3525 | S | S.Spu681ORF5580P (100% identity) | S.SpuCNORF3524P | |
| 3526 | 185 aa conserved hypothetical protein | |||
| 3980 | transcriptional regulator | |||
| 3981 | M | M1.Spu681ORF3210P (100% identity) | M1.SpuCNORF3981P | |
| 3982 | 209 aa conserved hypothetical protein | |||
| 3983 | transcriptional regulator | |||
| 3984 | M | M2.Spu681ORF3210P (100% identity) | M2.SpuCNORF3981P | |
| 3985 | S | S.Spu681ORF3210P (100% identity) | S.SpuCNORF3981P | |
| 3986 | R | Spu681ORF3210P (100% identity) | SpuCNORF3981P | |
| 3987 | 803 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3702 | 61 aa conserved hypothetical protein | |||
| 3703 | M | M.SspW3ORF3844P (100% identity) | GATC | M.SpuCNORF3703P |
| 3704 | Sporulation domain protein | |||
| 3925 | 183 aa hypothetical protein | |||
| 3926 | M | M.Spu681ORF3495P (92% identity) | M.SpuCNORF3926P | |
| 3927 | helix-turn-helix domain protein | |||
| 3938 | 515 aa hypothetical protein | |||
| 3939 | M | M.HseOs34ORFDP (47% identity) | M.SpuCNORF3939P | |
| 3940 | Integrase, catalytic region | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2909 | restriction modification system DNA specificity | |||
| 2910 | R | Spu681McrBP (100% identity) | SpuCNMcrBP | |
| 2911 | R | Spu681McrCP (99% identity) | SpuCNMcrCP | |
| 2912 | type I site-specific deoxyribonuclease, HsdR | |||