Ralstonia syzygii R24 |
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Putative Ralstonia syzygii R24 RM systems
Ref: Remenant,B. et al. PLoS One (2011) In press
REBASE ref # 13439
| Sequence length: | GenBank #: | |
| Chromosome: | 1,416,972 bp | FR854086 |
| Chromosome: | 824,421 bp | FR854092 |
| Chromosome: | 410,645 bp | FR854087 |
| Chromosome: | 953,372 bp | FR854088 |
REBASE acronym: RsyR24
Org_num: 7739
All begin RALSY_, RALSY_mp
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20388 | sensor histidine kinase | |||
| 20389 | R | Rsy24ORFFP (89% identity) | RsyR24ORF20391P | |
| 20390 | 284 aa conserved hypothetical protein | |||
| 20391 | M | M.Rsy24ORFFP (100% identity) | M.RsyR24ORF20391P | |
| 20392 | HTH-type transcriptional regulator nsrR | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10325 | tryptophan synthase, alpha chain | |||
| 10326 | M | M.UbaR229ORF60535P (100% identity) | M.RsyR24ORF10325P | |
| 10327 | tryptophan synthase, beta subunit | |||
| Chromosome | ||||
| 30441 | 266 aa conserved hypothetical protein (fragment) | |||
| 30442 | M | M.Rsy24ORFDP (100% identity) | M.RsyR24ORF30442P | |
| 30443 | 277 aa hypothetical protein | |||
| Chromosome | ||||
| 20208 | 80 aa conserved hypothetical protein | |||
| 20209 | M | M.Rsy24ORFEP (90% identity) | M1.RsyR24ORF20209P | |
| 20210 | M | M1.RpsPSS4ORFAP (81% identity) | M2.RsyR24ORF20209P | |
| 20211 | 71 aa conserved hypothetical protein | |||
| Chromosome | ||||
| 30372 | 676 aa conserved hypothetical protein | |||
| 30374 | M | M.Rsy24ORFBP (100% identity) | ACGGC | M.RsyR24ORF30374P |
| 30375 | 124 aa conserved hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 30010 | 583 aa conserved hypothetical protein | |||
| 30011 | M | M.Rsy24ORFAP (100% identity) | M.RsyR24ORF30011P | |
| 30012 | R | Rsy24ORFAP (100% identity) | RsyR24ORF30011P | |
| 30013 | integrase catalytic region (fragment) | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 30701 | oxacillin hydrolase (Class-d | |||
| 30702 | R | Rsy24McrCP (100% identity) | RsyR24McrCP | |
| 30704 | R | Rsy24McrBP (94% identity) | RsyR24McrBP | |
| 30705 | oxidoreductase (salicylyl-CoA | |||
| Chromosome | ||||
| 20407 | 226 aa conserved hypothetical protein | |||
| 20409 | R | UbaR229MrrP (97% identity) | RsyR24MrrP | |
| 20410 | 86 aa conserved hypothetical protein | |||