Escherichia coli PCN033 |
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Putative Escherichia coli PCN033 RM systems
Ref: Xu,Z. et al. unpublished
REBASE ref # 13371
| Sequence length: | GenBank #: | |
| Chromosome: | (contig set) | AFAT00000000 |
| Chromosome: | 4,987,957 bp | CP006632 |
REBASE acronym: Eco33
Org_num: 7734
All begin PPECC33_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 45680 | 49 aa hypothetical protein | |||
| 45690 | R | EcosS1ORF25140P (99% identity) | TGANNNNNNCTTC | Eco33ORF4738P |
| 45700 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco33ORF4738P |
| 45710 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco33ORF4738P |
| 45720 | 540 aa hypothetical protein | |||
| 42860 | 128 aa hypothetical protein | |||
| 42870 | M | M1.Sbo812ORFDP (85% identity) | M1.Eco33ORF4801P | |
| 42880 | M | M2.Sbo812ORFDP (99% identity) | M2.Eco33ORF4801P | |
| 42890 | S | S.Sbo812ORFDP (97% identity) | S.Eco33ORF4801P | |
| 42900 | R | Sbo812ORFDP (100% identity) | Eco33ORF4801P | |
| 42910 | Type I restriction-modification system | |||
| Chromosome | ||||
| 4736 | 540 aa hypothetical protein | |||
| 4737 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco33ORF4738P |
| 4738 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco33ORF4738P |
| 4739 | R | EcosS1ORF25140P (99% identity) | TGANNNNNNCTTC | Eco33ORF4738P |
| 4740 | 49 aa hypothetical protein | |||
| 4800 | DNA (cytosine-5-)-methyltransferase | |||
| 4801 | M | M1.Sbo812ORFDP (85% identity) | M1.Eco33ORF4801P | |
| 4802 | M | M2.Sbo812ORFDP (99% identity) | M2.Eco33ORF4801P | |
| 4803 | S | S.Sbo812ORFDP (97% identity) | S.Eco33ORF4801P | |
| 4804 | R | Sbo812ORFDP (100% identity) | Eco33ORF4801P | |
| 4805 | Type I restriction-modification system | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10490 | 65 aa hypothetical protein | |||
| 10500 | M | M.EcoDEC6AORF2338P (99% identity) | A | M.Eco33ORF1375P |
| 10510 | 51 aa hypothetical protein | |||
| 38710 | Replication gene A protein | |||
| 38720 | M | M.SflFF22ORF10P (100% identity) | GTCGAC | M.Eco33ORF4298P |
| 38730 | R | Eho218ORF15P (100% identity) | GTCGAC | Eco33ORF4298P |
| 38740 | 53 aa hypothetical protein | |||
| 31860 | DNA-binding protein fis | |||
| 31870 | M | M.Sbo812ORFBP (100% identity) | ATGCAT | M.Eco33ORF3583P |
| 31880 | 59 aa hypothetical protein | |||
| 24010 | transcriptional regulator, AlpA family | |||
| 24020 | M | M.EcosE1ORFEP (100% identity) | GATC | M.Eco33ORF2716P |
| 24030 | 47 aa hypothetical protein | |||
| 18510 | inner membrane transporter yedA | |||
| 18520 | V | V.EcoSCU102DcmP (100% identity) | V.Eco33DcmP | |
| 18530 | M | M.EcoSCU102DcmP (100% identity) | CCWGG | M.Eco33DcmP |
| 18540 | 231 aa hypothetical protein | |||
| 32830 | Ribulose-phosphate 3-epimerase | |||
| 32840 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco33DamP |
| 32850 | Protein damX | |||
| Chromosome | ||||
| 1374 | 65 aa hypothetical protein | |||
| 1375 | M | M.EcoDEC6AORF2338P (99% identity) | A | M.Eco33ORF1375P |
| 1376 | TciB/TerA-like protein | |||
| 2127 | transmembrane subunit | |||
| 2128 | V | V.EcoSCU102DcmP (100% identity) | V.Eco33DcmP | |
| 2129 | M | M.EcoSCU102DcmP (100% identity) | CCWGG | M.Eco33DcmP |
| 2130 | metal-dependent phosphohydrolase | |||
| 2715 | 83 aa hypothetical protein | |||
| 2716 | M | M.EcosE1ORFEP (100% identity) | GATC | M.Eco33ORF2716P |
| 2717 | 47 aa conserved hypothetical protein from phage | |||
| 3582 | global DNA-binding transcriptional dual | |||
| 3583 | M | M.Sbo812ORFBP (100% identity) | ATGCAT | M.Eco33ORF3583P |
| 3584 | YhdU | |||
| 3686 | D-ribulose-5-phosphate 3-epimerase | |||
| 3687 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco33DamP |
| 3688 | DamX protein | |||
| 4297 | phage replication initiation protein | |||
| 4298 | M | M.SflFF22ORF10P (100% identity) | GTCGAC | M.Eco33ORF4298P |
| 4299 | R | Eho218ORF15P (100% identity) | GTCGAC | Eco33ORF4298P |
| 4300 | 53 aa hypothetical protein | |||