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Putative Acidithiobacillus ferrivorans SS3 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 13214
Sequence length: | GenBank #: | |
Chromosome: | 3,152,659 bp | AFJD00000000 (NZ_AFJD00000000) |
Chromosome: | 3,207,552 bp | CP002985 (NC_015942) |
REBASE acronym: AfeSS3
Org_num: 7657
All begin Acife_, AcifeDRAFT_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
508 | SMP-30/Gluconolaconase/LRE-like | |||
509 | M | M.Afe6S08ORF12365P (99% identity) | M.AfeSS3ORF668P | |
510 | S | S2.Afe6S08ORF12365P (63% identity) | S.AfeSS3ORF668P | |
511 | 492 aa hypothetical protein | |||
512 | 319 aa hypothetical protein | |||
513 | 53 aa hypothetical protein | |||
514 | 73 aa hypothetical protein | |||
515 | filamentation induced by cAMP protein Fic | |||
516 | R | Afe6S08ORF12365P (99% identity) | AfeSS3ORF668P | |
517 | 111 aa hypothetical protein | |||
174 | 356 aa hypothetical protein | |||
175 | S | S.LspSJ36ORF445P (50% identity) | S.AfeSS3ORF165P | |
176 | 245 aa hypothetical protein | |||
Chromosome | ||||
160 | protein of unknown function DUF45 | |||
161 | R | LspSJ36ORF445P (90% identity) | AfeSS3ORF165P | |
162 | 245 aa hypothetical protein | |||
163 | S | S.LspSJ36ORF445P (50% identity) | S.AfeSS3ORF165P | |
164 | 356 aa hypothetical protein | |||
165 | M | M.TpaARh1ORF1910P (91% identity) | M.AfeSS3ORF165P | |
166 | 193 aa hypothetical protein | |||
300 | single-strand binding protein | |||
301 | M | M.Afe6S08ORF13725P (92% identity) | M.AfeSS3ORF301P | |
302 | S | S.Cph266ORF1712P (46% identity) | S.AfeSS3ORF301P | |
303 | 202 aa hypothetical protein | |||
304 | 202 aa hypothetical protein | |||
305 | Domain of unknown function DUF1814 | |||
306 | R | TspFBIIIP (84% identity) | AfeSS3ORF301P | |
307 | 62 aa hypothetical protein | |||
667 | SMP-30/Gluconolaconase/LRE-like | |||
668 | M | M.Afe6S08ORF12365P (99% identity) | M.AfeSS3ORF668P | |
669 | S | S2.Afe6S08ORF12365P (63% identity) | S.AfeSS3ORF668P | |
670 | 492 aa hypothetical protein | |||
671 | 319 aa hypothetical protein | |||
672 | 53 aa hypothetical protein | |||
673 | 73 aa hypothetical protein | |||
674 | filamentation induced by cAMP protein Fic | |||
675 | R | Afe6S08ORF12365P (99% identity) | AfeSS3ORF668P | |
676 | 111 aa hypothetical protein | |||
831 | 557 aa hypothetical protein | |||
832 | M | M.AthLicORFMP (85% identity) | M.AfeSS3ORF832P | |
833 | 270 aa hypothetical protein | |||
834 | SMC domain-containing protein | |||
835 | S | S.PspAK6UORFGP (80% identity) | S.AfeSS3ORF832P | |
836 | addiction module antidote protein, CC2985 | |||
837 | plasmid stabilization system | |||
838 | R | AspJHL3IIIP (88% identity) | AfeSS3ORF832P | |
839 | transcriptional regulator | |||
2251 | 390 aa hypothetical protein | |||
2252 | M | M.Dspc12ORF19055P (59% identity) | M.AfeSS3ORF2252P | |
2253 | S | S.AavSa2ORF960P (45% identity) | S.AfeSS3ORF2252P | |
2254 | protein of unknown function DUF891 | |||
2255 | 104 aa hypothetical protein | |||
2256 | stability protein StbD, putative | |||
2257 | addiction module toxin, RelE/StbE family | |||
2258 | R | NwaD1FHSORF18385P (65% identity) | AfeSS3ORF2252P | |
2259 | protein of unknown function DUF45 | |||
2403 | hypothetical protein | |||
2404 | R | Afe6S08ORF4395P (98% identity) | AfeSS3ORF2404P | |
2405 | hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
369 | 137 aa hypothetical protein | |||
370 | RM | SmaR01ORF3610P (53% identity) | AfeSS3ORF370P | |
371 | 143 aa hypothetical protein | |||
880 | 287 aa hypothetical protein | |||
881 | RM | AspAMDIV (87% identity) | AfeSS3ORF881P | |
882 | protein of unknown function DUF1016 | |||
2370 | 1179 aa hypothetical protein | |||
2371 | RM | AfeBYMORF5020AP (83% identity) | AfeSS3ORF2371AP | |
2372 | transcriptional regulator | |||
2373 | RM | Sam16289ORF1031210P (31% identity) | AfeSS3ORF2371BP | |
2374 | SMC domain protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
524 | 261 aa hypothetical protein | |||
525 | M | M.PaeLo4ORF8025P (85% identity) | M.AfeSS3ORF525P | |
526 | pseudogene | |||
527 | R | PaeTJM4ORFAP (88% identity) | AfeSS3ORF525P | |
528 | 77 aa hypothetical protein | |||
1805 | Phosphomethylpyrimidine synthase | |||
1806 | R | Afe5721ORF10987P (78% identity) | AfeSS3ORF1809P | |
1807 | protein of unknown function DUF86 | |||
1808 | DNA polymerase beta domain protein region | |||
1809 | M | adenine specific DNA methylase Mod | M.AfeSS3ORF1809P | |
1810 | KilA, /APSES-type HTH DNA-binding | |||
1947 | 374 aa hypothetical protein | |||
1948 | R | AfeBYMORF10675P (92% identity) | AfeSS3ORF1949P | |
1949 | M | M.AfeSS3ORF1948P (100% identity) | M.AfeSS3ORF1949P | |
1950 | 372 aa hypothetical protein | |||
1948 | type III restriction protein res subunit | |||
1949 | M | M.AfeSS3ORF1949P (100% identity) | M.AfeSS3ORF1948P | |
1950 | 372 aa hypothetical protein | |||
2180 | 357 aa hypothetical protein | |||
2181 | M | M.Afe5721ORF11251P (97% identity) | M.AfeSS3ORF2181P | |
2182 | DNA-damage-inducible protein D | |||
2183 | addiction module component CHP02574 | |||
2184 | R | Afe5721ORF11251P (95% identity) | AfeSS3ORF2181P | |
2185 | protein-export membrane protein SecF | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2249 | 41 aa hypothetical protein | |||
2250 | R | Psp1811MrrP (50% identity) | AfeSS3MrrP | |
2251 | 390 aa hypothetical protein |