Ref: You,X.Y. et al. J Genet Genomics 38 (6), 243-252 (2011)

REBASE ref # 13099

Sequence length:GenBank #:
Chromosome: 2,932,225 bp CP002573 (NC_015850)
plasmid megaplasmid: 251,782 bp CP002574 (NC_015851)
plasmid pLAtc3: 29,704 bp CP002577 (NC_015854)

REBASE acronym: AcaSM1

Org_num: 7305

 

All begin Atc_, Atc_3p, Atc_m

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
1132 115 aa conserved hypothetical protein
1133 M M.AcaMTH04ORF5325P (1% identity) M.AcaSM1ORF1133P
1134 211 aa conserved hypothetical protein
1135 S S.DvuVORF488P (0% identity) S.AcaSM1ORF1133P
1136 167 aa conserved hypothetical protein
 
1145 150 aa conserved hypothetical protein
1146 R AcaMTH04ORF5490P (1% identity) AcaSM1ORF1146P
1147 87 aa hypothetical protein
 
plasmid pLAtc3
 
28 conserved hypothetical protein
3 M M.AcaMTH04ORF5780P (0% identity) M.AcaSM1ORF3P
2 Conjugative transfer protein TrbL
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
433 transcriptional regulator, AbrB family
??? RM Aca51756ORF514P (0% identity) AcaSM1ORF434P
436 142 aa conserved hypothetical protein
 
1160 104 aa hypothetical protein
1161 RM AcaMTH04ORF5585P (1% identity) AcaSM1ORF1161P
1162 143 aa conserved hypothetical protein
 
1227 Thiol:disulfide interchange protein DsbG
1228 M M.Aca51756ORF1523P (0% identity) AAGCTT M.AcaSM1ORF1228P
1229 acyltransferase 3
 
1233 181 aa conserved hypothetical protein
??? M M.AthLicORFBP (0% identity) CCCGGG M.AcaSM1ORF1234P
1236 98 aa hypothetical protein
 
1247 388 aa conserved hypothetical protein
1248 M M.Xci7112ORF22525P (0% identity) CCGCGG M.AcaSM1ORF1248P
1249 71 aa conserved hypothetical protein
 
1279 DNA primase
1280 M M.AcaMTH04ORF6165P (1% identity) TGGCCA M.AcaSM1ORF1280P
1281 407 aa conserved hypothetical protein
 
2022 phage transcriptional regulator
2023 M M.AthCLSTORFBP (0% identity) GATC M.AcaSM1ORF2023P
2024 21 aa hypothetical protein
 
2079 46 aa conserved hypothetical protein
2080 M M.Bps56296ORF12690P (0% identity) CTGCAG M.AcaSM1ORF2080P
??? R MspNR41IIP (0% identity) CTGCAG AcaSM1ORF2080AP
2081 Transposase
2082 Transposase
2083 R MspNR41IIP (0% identity) CTGCAG AcaSM1ORF2080BP
2084 helix-turn-helix domain-containing protein
 
plasmid megaplasmid
 
167 137 aa conserved hypothetical protein
168 RM AcaMTH04ORF14780P (0% identity) AcaSM1ORF168P
169 DNA ligase III-like protein
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
1189 86 aa hypothetical protein
1190 R AcaSM1ORF1251P (0% identity) AcaSM1ORF1191P
1191 M M.GbeNIH71ORF8337P (0% identity) M.AcaSM1ORF1191P
1192 570 aa conserved hypothetical protein
 
1249 71 aa conserved hypothetical protein
1250 R LspCT6ORF7930P (0% identity) AcaSM1ORF1251P
1251 M M.Aac1023ORF14165P (0% identity) M.AcaSM1ORF1251P
1252 ISChy9, transposase orfB
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
1992 88 aa hypothetical protein
1993 R AcaMTH04MrrP (1% identity) AcaSM1MrrP
1994 112 aa conserved hypothetical protein