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Putative Rhodobacter sphaeroides ATCC 17029 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10013
Sequence length: | GenBank #: | |
chromosome 1: | 3,147,721 bp | CP000577 (NC_009049) |
chromosome 2: | 1,219,053 bp | CP000578 (NC_009050) |
REBASE acronym: Rsp17029
Org_num: 4717
All begin Rsph17029_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
1856 | 218 aa hypothetical protein | |||
1857 | M | M.PenDW29ORF14550P (80% identity) | M.Rsp17029ORF1857P | |
1858 | S | S.Pal408IV (45% identity) | S.Rsp17029ORF1857P | |
1859 | R | PspTRPORFBP (79% identity) | Rsp17029ORF1857P | |
1860 | 221 aa hypothetical protein | |||
chromosome 2 | ||||
3224 | 438 aa conserved hypothetical protein | |||
3225 | R | Rsp17025ORF3534P (98% identity) | Rsp17029ORF3226P | |
3226 | M | M.Rsp17025ORF3534P (97% identity) | M.Rsp17029ORF3226P | |
3227 | S | S.Rsu2351ORF876P (52% identity) | S.Rsp17029ORF3226P | |
3228 | 313 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
118 | alkane 1-monooxygenase | |||
119 | M | M.RspWS8NORF12765P (100% identity) | GANTC | M.Rsp17029ORF119P |
120 | Ribonuclease H | |||
652 | 68 aa hypothetical protein | |||
653 | M | M.PspSMMA5ORF3315P (57% identity) | M.Rsp17029ORF653P | |
654 | HNH endonuclease | |||
659 | protein of unknown function DUF1376 | |||
660 | M | M.RspBSW8ORF6165P (62% identity) | GATC | M.Rsp17029ORF660P |
661 | 202 aa hypothetical protein | |||
664 | helix-turn-helix domain protein | |||
665 | M | M.RspZRK36ORF9780P (45% identity) | M.Rsp17029ORF665P | |
666 | 407 aa hypothetical protein | |||
1845 | protein of unknown function DUF262 | |||
1846 | R | Pae19484aORF13950P (81% identity) | Rsp17029ORF1848P | |
1847 | 142 aa hypothetical protein | |||
1848 | M | M.SspHZN7ORF22020P (82% identity) | M.Rsp17029ORF1848P | |
1849 | 1098 aa hypothetical protein | |||
chromosome 2 | ||||
3003 | phage late control D family protein | |||
3004 | M | M.RspAB29ORF18470P (79% identity) | M.Rsp17029ORF3004P | |
3005 | protein of unknown function DUF450 | |||
3375 | 165 aa hypothetical protein | |||
3376 | M | M.RspWS8NORF465P (98% identity) | M.Rsp17029ORF3376P | |
3377 | 269 aa conserved hypothetical protein | |||
3384 | (AF322013) ID483 (Bradyrhizobium | |||
3385 | V | V.Psp4604ORF470P (79% identity) | V.Rsp17029ORF3387P | |
3386 | R | Psp4604ORF470P (92% identity) | CCWGG | Rsp17029ORF3387P |
3387 | M | M.Psp4604ORF470P (91% identity) | CCWGG | M.Rsp17029ORF3387P |
3388 | DNA topology modulation kinase FlaR, putative | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 2 | ||||
3191 | Integrase, catalytic region | |||
3192 | R | Rsp27ORFGP (89% identity) | Rsp17029ORF3192P | |
3193 | 156 aa hypothetical protein | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 2 | ||||
3295 | 84 aa hypothetical protein | |||
3296 | M | M.RspHJORF21190P (98% identity) | CTSSAG | M.Rsp17029ORF3296P |
3297 | 219 aa conserved hypothetical protein |