Methylibium petroleiphilum PM1 |
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Putative Methylibium petroleiphilum PM1 RM systems
Ref: Kane,S.R. et al. J. Bacteriol. 189 (5), 1931-1945 (2007)
REBASE ref # 9952
| Sequence length: | GenBank #: | |
| Chromosome: | 4,044,195 bp | CP000555 (NC_008825) |
| plasmid RPME01: | 599,444 bp | CP000556 (NC_008826) |
REBASE acronym: MpePM
Org_num: 4698
All begin Mpe_A, Mpe_B
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4 | 105 aa hypothetical protein | |||
| 5 | M | M.RspD18ORF4655P (76% identity) | M.MpePMORF5P | |
| 6 | S | S.PprDORF1855P (45% identity) | S.MpePMORF5P | |
| 7 | ATPase | |||
| 8 | 190 aa conserved hypothetical protein | |||
| 9 | 79 aa hypothetical protein | |||
| 10 | 383 aa conserved hypothetical protein | |||
| 11 | R | Rgu73ORF25545P (84% identity) | MpePMORF5P | |
| 12 | cyclic nucleotide-regulated FAD-dependent | |||
| 2994 | ATP-dependent endonuclease of the OLD | |||
| 2995 | R | MpePMORF5P (47% identity) | MpePMORF2995P | |
| 2996 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2382 | 363 aa hypothetical protein | |||
| 2383 | M | M.Xho108ORF22015P (92% identity) | M.MpePMORF2383P | |
| 2384 | 732 aa hypothetical protein | |||
| plasmid RPME01 | ||||
| 97 | 263 aa hypothetical protein | |||
| 98 | M | M.RgeMORFDP (66% identity) | CTCGAG | M.MpePMORF98P |
| 99 | 358 aa conserved hypothetical protein | |||
| 101 | 129 aa hypothetical protein | |||
| 102 | RM | AciSC074ORF17875P (63% identity) | MpePMORF102P | |
| 103 | 461 aa hypothetical protein | |||
| 221 | dihydrofolate reductase | |||
| 222 | M | M.Cpa614ORF430P (29% identity) | M.MpePMORF222P | |
| 223 | 115 aa hypothetical protein | |||
| 276 | 249 aa hypothetical protein | |||
| 277 | M | M.MsaSMR5ORF4263P (48% identity) | M.MpePMORF277P | |
| 278 | 381 aa conserved hypothetical protein | |||
| 339 | 175 aa hypothetical protein | |||
| 340 | M | M.RgeMORFAP (72% identity) | CCNGG | M.MpePMORF340P |
| 341 | 112 aa conserved hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3820 | 200 aa hypothetical protein | |||
| 3821 | M | M.AspNO1ORF4185P (22% identity) | M.MpePMORF3821P | |
| 3822 | 107 aa hypothetical protein | |||