Gamma proteobacterium IMCC1989 |
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Putative Gamma proteobacterium IMCC1989 RM systems
Ref: Jang,Y. et al. unpublished
REBASE ref # 13005
Contig set: 3,017,625 bp
GenBank #: AEVK00000000 (NZ_AEVK00000000)
REBASE acronym: Gpr1989
Org_num: 7257
All begin IMCC1989_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 146 | metal-dependent hydrolase | |||
| 147 | R | Cch9127ORFDP (81% identity) | Gpr1989ORF146P | |
| 232 | Topoisomerase IV subunit B | |||
| 233 | M | M.Mpo6ORF4860P (93% identity) | M.Gpr1989ORF233P | |
| ??? | S | S.MspSMC2ORF5610P (20% identity) | S.Gpr1989ORF233P | |
| 745 | 901 aa hypothetical protein | |||
| 746 | S | S2.GsuPLORF8925P (47% identity) | S.Gpr1989ORF746P | |
| ??? | M | M.VpaMAVP26ORF8575P (63% identity) | M.Gpr1989ORF746P | |
| 809 | M | M.Nha25378ORFBP (77% identity) | M.Gpr1989ORF809P | |
| 810 | R | CfrE51ORF21070P (71% identity) | Gpr1989ORF809P | |
| 898 | Sirohydrochlorin cobaltochelatase | |||
| 899 | R | TspBS02IP (95% identity) | Gpr1989ORF899P | |
| 900 | RhuM | |||
| 901 | type I restriction enzyme | |||
| 902 | Anticodon nuclease | |||
| 903 | S | S.SfoP33ORF1971P (33% identity) | S.Gpr1989ORF899P | |
| 1184 | 57 aa hypothetical protein | |||
| 1185 | M | M.Cza7MEORF2465P (90% identity) | M.Gpr1989ORF1185P | |
| 1186 | S | S3.TsuDNT53ORFUP (55% identity) | S.Gpr1989ORF1185P | |
| 1187 | 45 aa hypothetical protein | |||
| 1188 | DNA-binding protein in cluster with | |||
| 1189 | R | Psp003IP (81% identity) | Gpr1989ORF1185P | |
| 1190 | 261 aa hypothetical protein | |||
| 2130 | DNA-binding protein in cluster with | |||
| 2131 | S | S.PviBBR56ORF12615P (50% identity) | GAGNNNNNNNGTCA | S.Gpr1989ORF2131P |
| 2132 | 634 aa hypothetical protein | |||
| 2285 | M | type I restriction-modification system, M | M.Gpr1989ORF2285P | |
| 2286 | 287 aa hypothetical protein | |||
| 2287 | DNA-damage-inducible protein D | |||
| 2288 | S | S2.Men3599ORF6740P (34% identity) | S.Gpr1989ORF2285P | |
| ??? | R | type I site-specific deoxyribonuclease, HsdR family protein | Gpr1989ORF2285P | |
| ??? | M | type I restriction-modification system, M subunit | M.Gpr1989ORFBP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2172 | 389 aa hypothetical protein | |||
| 2173 | M | M.Bba38HORF8705P (59% identity) | GAATTC | M.Gpr1989ORF2173P |
| 2174 | 43 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 744 | M | M.HspGTORFBP (38% identity) | M.Gpr1989ORF744P | |
| 745 | R | TolMIL1ORF430P (80% identity) | Gpr1989ORF744P | |
| 746 | 193 aa hypothetical protein | |||
| 1359 | 387 aa hypothetical protein | |||
| ??? | M | DNA methylase N-4/N-6 domain-containing protein | M.Gpr1989ORFAP | |
| 1847 | R | TspBS02IIP (96% identity) | Gpr1989ORF1849P | |
| 1848 | 563 aa hypothetical protein | |||
| 1849 | M | M.BmaUis1BORF412P (37% identity) | M.Gpr1989ORF1849P | |
| 1850 | 276 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2132 | 634 aa hypothetical protein | |||
| 2133 | R | Mrr restriction system protein | Gpr1989MrrP | |
| 2134 | 38 aa hypothetical protein | |||