Curvibacter putative symbiont of Hydra magnipapillata |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Curvibacter putative symbiont of Hydra magnipapillata RM systems
Ref: Chapman,J.A. et al. Nature (2010) In press
REBASE ref # 11981
Contig GenBank #: FN543101, FN543103, FN543104, FN543105, FN543107
REBASE acronym: CspHM
Org_num: 6287
All begin Csp_A, Csp_C, Csp_D, Csp_E, Csp_G
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11660 | 93 aa hypothetical protein | |||
| 11670 | S | S.Pfl17298ORFFP (43% identity) | S.CspHMORF11680P | |
| 11680 | M | M.Zsp751ORFCP (90% identity) | M.CspHMORF11680P | |
| 11690 | 332 aa hypothetical protein | |||
| 11700 | R | PaqCORF7455P (74% identity) | CspHMORF11680P | |
| 11710 | 362 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22020 | 363 aa hypothetical protein | |||
| ??? | M | M.AavMDB1ORF10225P (74% identity) | M.CspHMORF22030P | |
| 22050 | V | V.AavMDB1ORF10225P (71% identity) | V.CspHMORF22030P | |
| 22060 | R | Psy32ORF18890P (46% identity) | CspHMORF22030P | |
| 22070 | 453 aa hypothetical protein | |||
| 2420 | 553 aa hypothetical protein | |||
| 2430 | M | M.Hps1084ORF7810P (93% identity) | M.CspHMORF2430P | |
| 2440 | 82 aa hypothetical protein | |||
| 24500 | Phospho-2-dehydro-3-deoxyheptonate aldolase, | |||
| 24510 | M | M.CspHMORFAP (100% identity) | M.CspHMORF24510P | |
| 24520 | 685 aa hypothetical protein | |||
| 24500 | Phospho-2-dehydro-3-deoxyheptonate aldolase, | |||
| 24510 | M | M.CspHMORF24510P (100% identity) | M.CspHMORFAP | |
| 24520 | 685 aa hypothetical protein | |||
| 33300 | 119 aa hypothetical protein | |||
| 33310 | M | M.BceS52ORF37130P (27% identity) | GTAC | M.CspHMORF33310P |
| 33320 | 262 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 38940 | 166 aa hypothetical protein | |||
| 38950 | M | M.AspI09ORF27420P (77% identity) | M.CspHMORF38950P | |
| ??? | R | CbaOS4ORF8130P (85% identity) | CspHMORF38950P | |
| 38980 | 194 aa hypothetical protein | |||
| 36600 | 666 aa hypothetical protein | |||
| 36610 | R | DsuPSORF3354P (87% identity) | CspHMORF36620P | |
| 36620 | M | M.MspBBA51ORFBP (69% identity) | M.CspHMORF36620P | |
| 36630 | Insertion element IS407 uncharacterized 10.0 kDa | |||