Sphingobium chlorophenolicum L-1 |
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Putative Sphingobium chlorophenolicum L-1 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 12878
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,080,818 bp | CP002798 (NC_015593) |
| plasmid pSPHCH01: | 123,733 bp | CP002800 (NC_015595) |
REBASE acronym: SchL1
Org_num: 7143
All begin Sphch_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2098 | alpha/beta hydrolase fold protein | |||
| 2099 | S | 255 aa hypothetical protein | S.SchL1ORF2099P | |
| 2100 | GIY-YIG nuclease family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1450 | dihydropteroate synthase | |||
| 1451 | M | M.SspG64ORF15130P (92% identity) | GANTC | M.SchL1ORF1451P |
| 1452 | 31 aa hypothetical protein | |||
| 1473 | Site-specific DNA recombinase | |||
| 1474 | M | M.Rli149ORF28230P (50% identity) | M.SchL1ORF1474P | |
| 1475 | 157 aa hypothetical protein | |||
| 1986 | 77 aa hypothetical protein | |||
| 1987 | M | M.Nsp18ORFEP (63% identity) | CCGCGG | M.SchL1ORF1987P |
| 1988 | R | SspG74ORF21470P (69% identity) | CCGCGG | SchL1ORF1987P |
| 1989 | 725 aa hypothetical protein | |||
| 1997 | (2Fe-2S)-binding domain-containing protein | |||
| 1998 | V | V.MspPchSORF6970P (66% identity) | V.SchL1ORF2001P | |
| 1999 | R | SspKRR8ORF8740P (70% identity) | GTCGAC | SchL1ORF2001P |
| 2000 | protein of unknown function DUF262 | |||
| 2001 | M | M.MspPchSORF6970P (77% identity) | GTCGAC | M.SchL1ORF2001P |
| 2002 | 486 aa hypothetical protein | |||
| 2410 | 281 aa hypothetical protein | |||
| 2411 | V | V.CspSK4ORF23430P (48% identity) | V.SchL1ORF2414P | |
| 2412 | R | BspBEA25ORF2695P (52% identity) | CRCCGGYG | SchL1ORF2414P |
| 2413 | C | C.Pla21025ORF29560P (53% identity) | C.SchL1ORF2414P | |
| 2414 | M | M.PspE001ORF15060P (60% identity) | CRCCGGYG | M.SchL1ORF2414P |
| 2415 | DEAD/DEAH box helicase domain protein | |||
| 2564 | cold-shock DNA-binding domain protein | |||
| 2565 | M | M.Esp20A1MORF6165P (80% identity) | RGATCY | M.SchL1ORF2565P |
| 2566 | R | Bsp2716ORF615P (68% identity) | GATC | SchL1ORF2565P |
| 2567 | transcriptional regulator, XRE family | |||
| plasmid pSPHCH01 | ||||
| 4148 | plasmid maintenance system antidote protein, XRE | |||
| 4149 | M | M.SwiDP58ORFAP (100% identity) | CTGCAG | M.SchL1ORF4149P |
| 4150 | R | SwiDP58ORFAP (100% identity) | CTGCAG | SchL1ORF4149P |
| 4151 | 82 aa hypothetical protein | |||