Halobacterium species NRC-1 |
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Putative Halobacterium species NRC-1 RM systems
Ref: Ng,W.V. et al. Proc. Natl. Acad. Sci. U.S.A. 97 (22), 12176-12181 (2000)
REBASE ref # 26293
| Sequence length: | GenBank #: | |
| chromosome: | 2,014,239 bp | AE004437 (NC_002607) |
| plasmid pNRC100: | 191,346 bp | AF016485 (NC_001869) |
| plasmid pNRC200: | 365,425 bp | AE004438 (NC_002608) |
REBASE acronym: HspN
Org_num: 1517
All begin VNG_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome | ||||
| 105 | 161 aa hypothetical protein | |||
| 106 | M | M.HspGSL18ORFDP (88% identity) | CAGNNNNNNTGCT | M.HspNI |
| 107 | S | S.HspGSL18ORFDP (100% identity) | CAGNNNNNNTGCT | S.HspNI |
| 108 | R | HspS9ORFCP (100% identity) | CAGNNNNNNTGCT | HspNIP |
| 110 | 241 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome | ||||
| 1542 | succinyl-CoA synthetase alpha chain | |||
| 1543 | M | M.HspS9I (100% identity) | CTAG | M.HspNII |
| 1544 | chloride channel | |||
| 2241 | 116 aa hypothetical protein | |||
| 2242 | M | M.Hsa2ORF10400P (49% identity) | M.HspNORF2242P | |
| 2243 | transcription initiation factor IID | |||
| plasmid pNRC100 | ||||
| ??? | RM | HspS9ORFAP (51% identity) | HspNORF7096AP | |
| ??? | RM | HspNORF6135BP (100% identity) | HspNORF7096BP | |
| ??? | 251 aa unknown | |||
| plasmid pNRC200 | ||||
| 6134 | Vng6134h | |||
| 6135 | RM | HspNORF7096AP (93% identity) | HspNORF6135AP | |
| 6136 | RM | HspNORF7096BP (100% identity) | HspNORF6135BP | |
| 6139 | ATP-dependent RNA helicase | |||
| Homing | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pNRC100 | ||||
| ??? | hypothetical protein | |||
| ??? | R | hypothetical protein | I-HspNIP | |
| ??? | hypothetical protein | |||