Porphyromonas gingivalis TDC60 |
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Putative Porphyromonas gingivalis TDC60 RM systems
Ref: Watanabe,T. et al. unpublished
REBASE ref # 13193
Complete sequence: 2,339,898 bp
GenBank #: AP012203 (NC_015571)
REBASE acronym: Pgi60
Org_num: 7124
All begin PGTDC60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1958 | 267 aa conserved hypothetical protein | |||
| 1959 | S | S1.PgiTDC60ORF1963P (88% identity) | S1.Pgi60ORF1963P | |
| 1960 | S | S2.PgiTDC60ORF1963P (100% identity) | S2.Pgi60ORF1963P | |
| 1961 | death-on-curing family protein | |||
| 1962 | DNA-binding protein | |||
| 1963 | M | M.PgiTDC60ORF1963P (100% identity) | M.Pgi60ORF1963P | |
| 1964 | R | PgiTDC60ORF1963P (100% identity) | Pgi60ORF1963P | |
| 1965 | C | C.PgiTDC60ORF1963P (100% identity) | C.Pgi60ORF1963P | |
| 1966 | DNA methylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 603 | 47 aa hypothetical protein | |||
| 604 | RM | PgiTDC60ORF605BP (100% identity) | Pgi60ORF604P | |
| 605 | type II DNA modification methyltransferase, | |||
| 604 | type II restriction endonuclease, putative | |||
| 605 | RM | Pin2903ORF8480AP (100% identity) | Pgi60ORF605P | |
| 606 | 154 aa hypothetical protein | |||
| 1574 | 37 aa hypothetical protein | |||
| 1575 | M | M.PgiTDC60ORF1575P (100% identity) | CTAG | M.Pgi60ORF1575P |
| 1576 | 97 aa hypothetical protein | |||
| 1577 | R | Pgi2805ORF9150P (100% identity) | CTAG | Pgi60ORF1575P |
| 1578 | integrase | |||
| 1936 | RloC protein | |||
| 1937 | S | S.PgiTDC60ORF1938P (100% identity) | S.Pgi60ORF1938P | |
| ??? | M | M.PgiTDC60ORF1938P (100% identity) | M.Pgi60ORF1938P | |
| 1940 | 90 aa hypothetical protein | |||
| 2008 | 372 aa hypothetical protein | |||
| 2009 | M | M.Tfo2417ORF12465P (100% identity) | ACGGC | M.Pgi60ORF2009P |
| 2010 | 182 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2082 | 150 aa hypothetical protein | |||
| 2083 | M | M.PgiTDC60ORF2083P (100% identity) | M.Pgi60ORF2083P | |
| 2084 | R | PgiTDC60ORF2083P (100% identity) | Pgi60ORF2083P | |
| 2085 | amino acid exporter, putative | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 889 | 44 aa hypothetical protein | |||
| 890 | R | PgiTDC60MrrP (100% identity) | Pgi60MrrP | |
| 891 | S-adenosylmethionine:tRNA | |||