Haemophilus influenzae Rd |
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Putative Haemophilus influenzae Rd RM systems
Ref: Langen,H. et al. Electrophoresis 21 (2), 411-429 (2000)
REBASE ref # 13841
Complete sequence: 1,830,138 bp
GenBank #: L42023 (NC_000907)
REBASE acronym: Hind
Org_num: 1496
All begin HI_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 214 | oligopeptidase A (prlC) | |||
| 215 | M | M.HindNORF215P (100% identity) | M.HindORF215P | |
| 216 | S | S.HindNORF215P (100% identity) | S.HindORF215P | |
| 217 | 176 aa conserved hypothetical protein | |||
| 218 | R | HindNORF215P (100% identity) | HindORF215P | |
| 219 | 213 aa conserved hypothetical transmembrane protein | |||
| 1284 | translation initiation factor 2 (infB) | |||
| 1285 | R | HindNI (100% identity) | RAACNNNNNTAG | HindI |
| 1286 | S | S.HindNI (100% identity) | RAACNNNNNTAG | S.HindI |
| 1287 | M | type I modification enzyme (hsdM) | RAACNNNNNTAG | M.HindI |
| 1288 | ribosome binding factor A (rbfA) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 208 | 3-dehydroquinate synthase (aroB) | |||
| 209 | M | M.HinR548Dam (99% identity) | GATC | M.HindDam |
| 210 | predicted coding region HI0210 | |||
| 511 | tellurite resistance protein (tehA) | |||
| 512 | R | HindNII (100% identity) | GTYRAC | HindII |
| 513 | M | M.HindNII (100% identity) | GTYRAC | M.HindII |
| 514 | DNA-directed RNA polymerase, beta chain (rpoC) | |||
| 1038 | 400 aa conserved hypothetical protein | |||
| 1040 | R | HindNVP (100% identity) | GRCGYC | HindVP |
| 1041 | M | M.HindNVP (99% identity) | GRCGYC | M.HindV |
| 1042 | pseudogene | |||
| 1391 | valyl-tRNA synthetase (valS) | |||
| 1392 | M | M.HinR548III (99% identity) | AAGCTT | M.HindIII |
| 1393 | R | HindNIII (99% identity) | AAGCTT | HindIII |
| 1394 | 123 aa conserved hypothetical protein | |||
| 1522 | predicted coding region HI1522.1 | |||
| 1523 | M | M.HindNVII (100% identity) | BA | M.HindVII |
| 1524 | predicted coding region HI1524 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1053 | 113 aa conserved hypothetical protein | |||
| ??? | R | HindNVIP (98% identity) | CGAAT | HindVIP |
| ??? | M | M.HindNVIP (100% identity) | CGAAT | M.HindVI |
| 1059 | ribonuclease HII (rnhB) | |||