Genome Report of Helicobacter pylori BS28-1

Helicobacter pylori BS28-1

[index] - [schematics] - [save as Word doc]

Putative Helicobacter pylori BS28-1 RM systems

GenBank: CP122950 (1,617,424 bp)

Type	Gene	Name	Predicted Rec Seq	Coordinates

I	M	M.HpyBS281ORF3240P	AAGNNNNNNTAG	673559-675131
I	S	S.HpyBS281ORF3240P	AAGNNNNNNTAG	675141-676469
I	R	HpyBS281ORF3240P	AAGNNNNNNTAG	676484-679483

I	R	HpyBS281ORF5165P		1087936-1090221
I	M	M.HpyBS281ORF5165P		1090214-1091845
I	S	S.HpyBS281ORF5165P		1091838-1092935

I	R	HpyBS281ORF7675P		1606135-1609098 c
I	M	M.HpyBS281ORF7675P		1609168-1611621
I	S	S.HpyBS281ORF7675P		1612472-1613653

II	RM	HpyBS281ORF55P		11999-15553

II	R	HpyBS281ORF140P	CCATC	33511-35127 c
II	M	M1.HpyBS281ORF140P	CCATC	35134-36033 c
II	M	M2.HpyBS281ORF140P	CCATC	36030-37031 c

II	RM	HpyBS281ORF280P	CAANNNNNNTTG	62105-64143
II	S	S.HpyBS281ORF280P		64140-65360

II	M	M1.HpyBS281ORF340P		75455-76561
II	M	M2.HpyBS281ORF340P		76561-77514
II	R	HpyBS281ORF340P		77517-78695

II	R	HpyBS281ORF590P	GAATTC	123800-124646
II	M	M.HpyBS281ORF590P	GAATTC	124627-125590

II	RM	HpyBS281ORF840P		179511-183113

II	R	HpyBS281ORF1190P	GATATC	233736-234577
II	M	M.HpyBS281ORF1190P	GATATC	234577-235484

II	R	HpyBS281ORF1590P	CATG	312331-313017
II	M	M.HpyBS281ORF1590P	CATG	313026-314015

II	R	HpyBS281ORF1770P	TCNGA	351038-351550 c
II	M	M.HpyBS281ORF1770P	TCNGA	351510-352808 c

II	M	M.HpyBS281ORF2060P	GCGC	411369-412325

II	R	HpyBS281ORF2250P	TCNNGA	450290-450839 c
II	M	M.HpyBS281ORF2250P	TCNNGA	450839-451800 c

II	M	M.HpyBS281ORF2605P		530855-532198

II	M	M.HpyBS281ORF2955P	GTNNAC	615300-616446 c
II	R	HpyBS281ORF2955P	GTNNAC	616456-617043 c

II	R	HpyBS281ORF3235P	GGCC	671436-672389 c
II	M	M.HpyBS281ORF3235P	GGCC	672386-673369 c

II	RM	HpyBS281ORF4120P		854593-859444 c

II	R	HpyBS281ORF4940P	GTAC	1042118-1042873 c
II	M	M.HpyBS281ORF4940P	GTAC	1042860-1043852 c

II	R	HpyBS281ORF5045P	ACGT	1065140-1065888 c
II	M	M.HpyBS281ORF5045P	ACGT	1065891-1066936 c

II	R	HpyBS281ORF5060P	ACNGT	1067028-1067651 c
II	M	M.HpyBS281ORF5060P	ACNGT	1067654-1068583 c

II	M	M.HpyBS281ORF5075P	ATTAAT	1071252-1072890 c

II	M	M.HpyBS281ORF6025P	CCGG	1266218-1266976 c
II	R	HpyBS281ORF6025P	CCGG	1266974-1267667 c

II	M	M.HpyBS281ORF6855P		1437725-1438555 c

II	M	M.HpyBS281ORF7050P	CCTTC	1480615-1483086
II	R	HpyBS281ORF7050P	CCTTC	1483083-1483928

II	R	HpyBS281ORF7065P	CCTC	1483944-1485170
II	M	M1.HpyBS281ORF7065P	CCTC	1485167-1486234
II	M	M2.HpyBS281ORF7065P	CCTC	1486231-1486929

II	R	HpyBS281ORF7590P	TGCA	1588008-1588739 c
II	M	M.HpyBS281ORF7590P	TGCA	1588732-1589628 c

III	M	M.HpyBS281ORF40AP		6949-8388
III	M	M.HpyBS281ORF40BP		8366-8977
III	R	HpyBS281ORF40P		8980-11892

III	R	HpyBS281ORF715P		148613-151057
III	M	M.HpyBS281ORF715P		151051-152763

III	R	HpyBS281ORF775P		163503-166415 c
III	M	M.HpyBS281ORF775P		166425-168892 c

III	M	M.HpyBS281ORF4485P		947817-949691 c
III	R	HpyBS281ORF4485P		949688-952624 c

IV	R	HpyBS281GmrSDP		898581-900626 c

IV	R	HpyBS281GmrSD2P		1032121-1034205 c

Tech Support Feedback NEB Overview Site Map Trademarks Legal and Disclaimers Privacy Cookie Policy Terms of Use