Genome Report of Helicobacter pylori J99 derivative

Helicobacter pylori J99 derivative

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Putative Helicobacter pylori J99 derivative RM systems

GenBank: CP089283 (1,685,094 bp)

Type	Gene	Name	Predicted Rec Seq	Coordinates

I	S	S.HpyJ99aORF685P	AAGNNNNNNCTC	155044-156396 c

I	R	HpyJ99aORF995P		208737-211739 c
I	S	S.HpyJ99aORF995P		211902-213197 c
I	M	M.HpyJ99aORF995P		213208-214794 c

I	S	S.HpyJ99aORF4490P	CTTTANNNNNNCTT	948348-950210 c
I	M	M.HpyJ99aORF4490P	CTTTANNNNNNCTT	950219-952666 c
I	R	HpyJ99aORF4490P	CTTTANNNNNNCTT	952737-955712

I	S	S.HpyJ99aORF6990P	CCANNNNNNTTT	1472741-1473970 c
I	M	M.HpyJ99aORF6990P	CCANNNNNNTTT	1473963-1475594 c
I	R	HpyJ99aORF6990P	CCANNNNNNTTT	1475587-1478719 c

II	RM	HpyJ99aORF105P		22088-26909

II	M	M.HpyJ99aORF195P	CCNNGG	47662-48876
II	R	HpyJ99aORF195P	CCNNGG	48879-49751

II	R	HpyJ99aORF835P	CGWCG	180313-180885 c
II	M	M.HpyJ99aORF835P	CGWCG	180879-181697 c

II	R	HpyJ99aORF1310P	GTNNAC	274342-274923
II	M	M.HpyJ99aORF1310P	GTNNAC	274933-276078

II	M	M.HpyJ99aORF2305P	TCNNGA	513164-514126
II	R	HpyJ99aORF2305P	TCNNGA	514126-514674

II	R	HpyJ99aORF2515P	GCGC	555565-556317 c
II	M	M.HpyJ99aORF2515P	GCGC	556310-557257 c

II	M	M.HpyJ99aORF2970P	CATG	652517-653506 c

II	R	HpyJ99aORF3680P	GANTC	773043-773915 c
II	M	M.HpyJ99aORF3680P	GANTC	773915-774994 c

II	RM	HpyJ99aORF3690P	GGWTAA	775253-778615 c

II	S	S.HpyJ99aORF4185P	CYANNNNNNTGA	880409-881629 c
II	RM	HpyJ99aORF4185P	CYANNNNNNTGA	881626-883662 c

II	RM	HpyJ99aORF4405P		928678-932397 c

II	M	M.HpyJ99aORF5115P	GTSAC	1080616-1081647 c
II	R	HpyJ99aORF5115P	GTSAC	1081657-1082439 c

II	R	HpyJ99aORF5315P	GATC	1122921-1123752
II	M	M.HpyJ99aORF5315P	GATC	1123749-1124582

II	M	M.HpyJ99aORFAP		1207450-1207709
II	R	R1.HpyJ99aORFAP		1207684-1209030
II	R	R2.HpyJ99aORFAP		1209023-1210243

II	M	M.HpyJ99aORF6120P	TCGA	1295734-1296888 c

II	R	HpyJ99aORF6135P	CCGG	1297443-1298133
II	M	M.HpyJ99aORF6135P	CCGG	1298130-1298888

II	M	M.HpyJ99aORF7070P	ATTAAT	1492920-1494557

II	M	M.HpyJ99aORF7085P	ACNGT	1497232-1498161
II	R	HpyJ99aORF7085P	ACNGT	1498164-1498779

II	M	M.HpyJ99aORF7095P	ACGT	1498873-1499928
II	R	HpyJ99aORF7095P	ACGT	1499921-1500673

II	M	M.HpyJ99aORF7195P	GTAC	1522394-1523386
II	R	HpyJ99aORF7195P	GTAC	1523373-1524128

III	M	M.HpyJ99aORF3750P		789359-791308
III	R	HpyJ99aORF3750P		791318-794236

III	M	M.HpyJ99aORF3815P		805371-807233 c
III	R	HpyJ99aORF3815P		807227-809749 c

III	R	HpyJ99aORF4420P	GWCAY	932807-935719 c
III	M	M.HpyJ99aORF4420P	GWCAY	935722-937647 c

GenBank: CP089284 (1,653,204 bp)

Type	Gene	Name	Predicted Rec Seq	Coordinates

I	M	M.HpyJ99bORF2750P		570181-571767
I	S	S.HpyJ99bORF2750P		571778-573061
I	R	HpyJ99bORF2750P		573224-576226

I	S	S.HpyJ99bORF3060P		628767-629930

I	R	HpyJ99bORF4675P	CCANNNNNNTTT	991470-994592
I	M	M.HpyJ99bORF4675P	CCANNNNNNTTT	994585-996216
I	S	S.HpyJ99bORF4675P	CCANNNNNNTTT	996209-997438

I	R	HpyJ99bORF7180P		1514374-1517349 c
I	M	M.HpyJ99bORF7180P		1517420-1519867
I	S	S.HpyJ99bORF7180P		1519876-1521126

II	RM	HpyJ99bORF160P	GGWCNA	37298-40790

II	M	M.HpyJ99bORF175P	GANTC	40919-41998
II	R	HpyJ99bORF175P	GANTC	41998-42870

II	M	M.HpyJ99bORF895P	CATG	166521-167510

II	M	M.HpyJ99bORF1350P	GCGC	262770-263717
II	R	HpyJ99bORF1350P	GCGC	263710-264462

II	R	HpyJ99bORF1560P	TCNNGA	305355-305903 c
II	M	M.HpyJ99bORF1560P	TCNNGA	305903-306865 c

II	M	M.HpyJ99bORF2440P	GTNNAC	508897-510042 c
II	R	HpyJ99bORF2440P	GTNNAC	510052-510634 c

II	M	M.HpyJ99bORF2910P	CGWCG	603265-604083
II	R	HpyJ99bORF2910P	CGWCG	604077-604649

II	R	HpyJ99bORF3555P	CCNNGG	735369-736241 c
II	M	M.HpyJ99bORF3555P	CCNNGG	736244-737458 c

II	RM	HpyJ99bORF3645P		758211-763032 c

II	R	HpyJ99bORF4470P	GTAC	946062-946817 c
II	M	M.HpyJ99bORF4470P	GTAC	946804-947796 c

II	R	HpyJ99bORF4570P	ACGT	969516-970268 c
II	M	M.HpyJ99bORF4570P	ACGT	970261-971316 c

II	R	HpyJ99bORF4580P	ACNGT	971410-972025 c
II	M	M.HpyJ99bORF4580P	ACNGT	972028-972957 c

II	M	M.HpyJ99bORF4595P	ATTAAT	975632-977269 c

II	M	M.HpyJ99bORF5535P	CCGG	1171292-1172050 c
II	R	HpyJ99bORF5535P	CCGG	1172047-1172737 c

II	M	M.HpyJ99bORF5550P	TCGA	1173292-1174446

II	R	R1.HpyJ99bORFAP		1259927-1261147 c
II	R	R2.HpyJ99bORFAP		1261140-1262486 c
II	M	M.HpyJ99bORFAP		1262461-1262720 c

II	M	M.HpyJ99bORF6355P	GATC	1345603-1346436 c
II	R	HpyJ99bORF6355P	GATC	1346433-1347264 c

II	R	HpyJ99bORF6555P	GTSAC	1387746-1388528
II	M	M.HpyJ99bORF6555P	GTSAC	1388538-1389569

II	RM	HpyJ99bORF7265P		1537076-1540795

II	RM	HpyJ99bORF7485P	CYANNNNNNTGA	1585809-1587846
II	S	S.HpyJ99bORF7485P	CYANNNNNNTGA	1587843-1589063

III	R	HpyJ99bORF35P		6188-8686
III	M	M.HpyJ99bORF35P		8680-10542

III	R	HpyJ99bORF100P		21677-24595 c
III	M	M.HpyJ99bORF100P		24605-26554 c

III	M	M.HpyJ99bORF7250P	GWCAY	1531827-1533752
III	R	HpyJ99bORF7250P	GWCAY	1533755-1536666

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