Genome Report of Helicobacter pylori #3

Helicobacter pylori #3

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Putative Helicobacter pylori #3 RM systems

GenBank: AP024962 (1,585,790 bp)

Type	Gene	Name	Predicted Rec Seq	Coordinates

I	S	S.Hpy3ORF70P		3887-4930 c
I	M	M.Hpy3ORF70BP		5862-7340 c
I	M	M.Hpy3ORF70AP		7361-8323 c
I	R	Hpy3ORF70AP		8392-9606
I	R	Hpy3ORF70BP		9610-11370

I	S	S.Hpy3ORF5480P		549670-550920 c
I	M	M.Hpy3ORF5480P		550913-552544 c
I	R	Hpy3ORF5480BP		552534-554813 c
I	R	Hpy3ORF5480AP		555010-555663 c

I	S	S.Hpy3ORF8680P		903673-904986 c

I	R	Hpy3ORF9290P		955997-958606 c
I	S	S.Hpy3ORF9290P		959003-960295 c
I	M	M.Hpy3ORF9290P		960288-961877 c

II	M	M.Hpy3ORF290P	TGCA	28669-29565
II	R	Hpy3ORF290P	TGCA	29558-30288

II	RM	Hpy3ORF1280P		127292-129700

II	M	M.Hpy3ORF1300P	GANTC	130918-131997
II	R	Hpy3ORF1300P	GANTC	131997-132890

II	M	M1.Hpy3ORF1420P	CCTC	141522-142220 c
II	M	M2.Hpy3ORF1420P	CCTC	142217-143284 c
II	R	Hpy3ORF1420P	CCTC	143281-144504 c

II	R	Hpy3ORF1470P	CCTTC	144652-145912 c
II	M	M.Hpy3ORF1470P	CCTTC	145912-148380 c

II	M	M.Hpy3ORF2320P	GATC	231377-232201 c

II	R	Hpy3ORF3680P		366373-367026

II	M	M.Hpy3ORF4610P		464505-465434

II	M	M.Hpy3ORF5650P	ATTAAT	569708-571345

II	M	M.Hpy3ORF5680P	ACNGT	574020-574950
II	R	Hpy3ORF5680P	ACNGT	574953-575576

II	M	M.Hpy3ORF5720P	ACGT	575671-576729
II	R	Hpy3ORF5720P	ACGT	576917-577471

II	RM	Hpy3ORF7530AP		778408-779679
II	RM	Hpy3ORF7530BP		779687-782524

II	M	M.Hpy3ORF7710P		802357-803661 c
II	R	Hpy3ORF7710P		803724-804365

II	M	M.Hpy3ORF9300P		962059-963043
II	R	Hpy3ORF9300P		963040-963903

II	R	Hpy3ORF9860P	GTNNAC	1019921-1020544
II	M	M.Hpy3ORF9860P	GTNNAC	1020513-1021673

II	M	M.Hpy3ORF11130P	TCNNGA	1168368-1169330
II	R	Hpy3ORF11130P	TCNNGA	1169330-1169878

II	M	M.Hpy3ORF11470P	GCGC	1206334-1207293 c

II	M	M.Hpy3ORF12330P	CATG	1301667-1302650 c
II	R	Hpy3ORF12330P	CATG	1302659-1303158 c

II	R	Hpy3ORF14470P		1504443-1505705 c
II	M	M1.Hpy3ORF14470P		1505708-1506661 c
II	M	M2.Hpy3ORF14470P		1506661-1507767 c

II	S	S2.Hpy3ORF14610P		1517890-1518447 c
II	S	S1.Hpy3ORF14610P		1518474-1519136 c
II	RM	Hpy3ORF14610P		1519133-1521172 c

II	M	M1.Hpy3ORF14880P	CCATC	1546230-1547231
II	M	M2.Hpy3ORF14880P	CCATC	1547228-1548127
II	R	Hpy3ORF14880P	CCATC	1548209-1549747

II	RM	Hpy3ORF15090P		1570141-1573923 c

III	M	M.Hpy3ORF13870P		1441095-1443023 c
III	R	Hpy3ORF13870P		1443017-1445353 c

III	R	Hpy3ORF15110P		1574029-1576947 c
III	M	M.Hpy3ORF15110P		1576950-1578852 c

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