Genome Report of Helicobacter pylori LIM-002

Helicobacter pylori LIM-002

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Putative Helicobacter pylori LIM-002 RM systems

GenBank: CP051540 (1,615,900 bp)

Type	Gene	Name	Predicted Rec Seq	Coordinates

I	S	S.HpyLIM2III	CCANNNNNNTTA	501549-502799 c
I	M	M.HpyLIM2III	CCANNNNNNTTA	502792-504423 c
I	R	HpyLIM2IIIP	CCANNNNNNTTA	504416-507550 c

I	M	M.HpyLIM2ORF2675P		559673-561283
I	S	S.HpyLIM2ORF2675P		561294-562610
I	R	HpyLIM2ORF2675P		562612-565611

I	S	S.HpyLIM2ORF2970P		615604-616935

I	S	S.HpyLIM2ORF6790P		1428001-1429137 c

I	S	S.HpyLIM2ORF7305P		1536223-1537329 c
I	M	M.HpyLIM2ORF7305P		1537338-1539785 c
I	R	HpyLIM2ORF7305P		1539855-1542830

II	M	M.HpyLIM2ORF265P		49533-50387

II	M	M.HpyLIM2ORF400P	GATATC	84151-85056 c
II	R	HpyLIM2ORF400P	GATATC	85056-85898 c

II	M	M1.HpyLIM2VI	GAAGA	88626-89489
II	M	M2.HpyLIM2VI	GAAGA	89476-90258
II	R	HpyLIM2VIP	GAAGA	90274-91545

II	M	M.HpyLIM2VII	GANTC	102508-103587
II	R	HpyLIM2VIIP	GANTC	103587-104475

II	M	M1.HpyLIM2V	CCTC	105906-106604 c
II	M	M2.HpyLIM2VP	CCTC	106601-107668 c
II	R	HpyLIM2VP	CCTC	107665-108888 c

II	M	M.HpyLIM2VIII	GATC	150600-151421

II	M	M.HpyLIM2XI	TCGA	327999-329171 c

II	R	HpyLIM2ORF1585P	CCGG	329939-330571
II	M	M.HpyLIM2ORF1585P	CCGG	330661-331420

II	M	M.HpyLIM2II	ATTAAT	521734-523371


II	M	M.HpyLIM2XV	ACNGT	526046-526975
II	R	HpyLIM2XVP	ACNGT	526978-527600

II	M	M.HpyLIM2ORF2520P		527696-528272

II	R	HpyLIM2IVP	CCNNGG	721729-722601 c
II	M	M.HpyLIM2IV	CCNNGG	722604-723818 c

II	RM	HpyLIM2ORF3560P		745010-749779 c

II	R	HpyLIM2IXP	GTAC	893635-894390 c
II	M	M.HpyLIM2IX	GTAC	894377-895369 c

II	R	HpyLIM2XP	GTNNAC	940448-941029
II	M	M.HpyLIM2X	GTNNAC	941051-942184

II	M	M.HpyLIM2XIII	TCNNGA	1142347-1143309
II	R	HpyLIM2XIIIP	TCNNGA	1143309-1143858

II	M	M.HpyLIM2ORF5505P	GCGC	1183613-1184551 c

II	M	M.HpyLIM2XII	TCNGA	1243354-1244652
II	R	HpyLIM2XIIP	TCNGA	1244612-1245124

II	R	HpyLIM2ORF6720P		1413380-1414208 c

II	S	S.HpyLIM2ORF6995P		1465959-1467164 c
II	RM	HpyLIM2ORF6995P		1467161-1469200 c

II	RM	HpyLIM2ORF7220P		1514111-1517905 c

II	M	M.HpyLIM2XIV	TGCA	1560849-1561745
II	R	HpyLIM2XIVP	TGCA	1561738-1562469

III	R	HpyLIM2ORF330P		63448-65991
III	M	M.HpyLIM2ORF330P		65985-67880

III	R	HpyLIM2ORF395P		78710-81616 c
III	M	M.HpyLIM2ORF395P		81626-84081 c

III	M	M.HpyLIM2ORF410P		85993-88448 c

III	R	HpyLIM2ORF7235P		1520324-1523233 c
III	M	M.HpyLIM2ORF7235P		1523236-1525205 c

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