Genome Report of Helicobacter pylori LIM-006

Helicobacter pylori LIM-006

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Putative Helicobacter pylori LIM-006 RM systems

GenBank: CP051493 (1,745,296 bp)

Type	Gene	Name	Predicted Rec Seq	Coordinates

I	S	S.HpyLIM6ORF2275P	CCANNNNNNTTA	470717-471967 c
I	M	M.HpyLIM6ORF2275P	CCANNNNNNTTA	471960-473591 c
I	R	HpyLIM6ORF2275P	CCANNNNNNTTA	473584-476731 c

I	S	S.HpyLIM6ORF3925P		844919-846253 c

I	R	HpyLIM6ORF4425P	CAANNNNNNNTTC	942371-945388 c
I	S	S.HpyLIM6ORF4425P	CAANNNNNNNTTC	945393-946604 c
I	M	M.HpyLIM6ORF4425P	CAANNNNNNNTTC	946615-948209 c

I	S	S.HpyLIM6ORF7825P		1665719-1666858 c
I	M	M.HpyLIM6ORF7825P		1666864-1669317 c
I	R	HpyLIM6ORF7825P		1669356-1672331

II	M	M1.HpyLIM6III	CCTC	49427-50125 c
II	M	M2.HpyLIM6IIIP	CCTC	50103-51188 c
II	R	HpyLIM6IIIP	CCTC	51185-52408 c

II	M	M.HpyLIM6IX	GTSAC	52777-53808 c
II	R	HpyLIM6IXP	GTSAC	53818-54600 c

II	M	M.HpyLIM6VI	GATC	96772-97593

II	M	M.HpyLIM6XIII	TCGA	291086-292258 c

II	R	HpyLIM6ORF1415P	CCGG	292568-293265
II	M	M.HpyLIM6ORF1415P	CCGG	293263-294022

II	M	M.HpyLIM6ORF1840P		385287-386216


II	M	M.HpyLIM6XI	ATTAAT	490924-492561

II	M	M.HpyLIM6ORF2365P	ACGT	495220-496275
II	R	HpyLIM6ORF2365P	ACGT	496268-497022

II	M	M.HpyLIM6VII	GTAC	519596-520588
II	R	HpyLIM6VIIP	GTAC	520575-521207

II	RM	HpyLIM6ORF3350P		713646-718467

II	R	HpyLIM6VIIIP	GTNNAC	1004548-1005159
II	M	M.HpyLIM6VIII	GTNNAC	1005156-1006295

II	M	M.HpyLIM6ORF5595P	TCNNGA	1212444-1213407
II	R	HpyLIM6ORF5595P	TCNNGA	1213407-1213877

II	M	M.HpyLIM6ORF5795P	GCGC	1253571-1254509 c

II	R	HpyLIM6VP	GANTC	1478365-1479237 c
II	M	M.HpyLIM6V	GANTC	1479237-1480316 c

II	RM	HpyLIM6ORF6985P		1480460-1484070 c

II	R	HpyLIM6IVP	GAAGA	1494713-1495984 c
II	M	M1.HpyLIM6IV	GAAGA	1496000-1496782 c
II	M	M2.HpyLIM6IV	GAAGA	1496769-1497632 c

II	R	HpyLIM6ORF7075P	GATATC	1500424-1501266
II	M	M.HpyLIM6ORF7075P	GATATC	1501266-1502171

II	S	S.HpyLIM6XII	CYANNNNNNTCC	1593111-1594307 c
II	RM	HpyLIM6XII	CYANNNNNNTCC	1594304-1596340 c

II	M	M1.HpyLIM6II	CCATC	1621583-1622380
II	M	M2.HpyLIM6II	CCATC	1622377-1623276
II	R	HpyLIM6IIP	CCATC	1623282-1624898

II	RM	HpyLIM6ORF7740P		1646160-1649720 c

II	M	M.HpyLIM6X	TGCA	1691741-1692637
II	R	HpyLIM6XP	TGCA	1692630-1693361

III	M	M.HpyLIM6ORF7065P		1497879-1500329

III	M	M.HpyLIM6ORF7080P		1502243-1504714
III	R	HpyLIM6ORF7080P		1504725-1507628

III	M	M.HpyLIM6ORF7140P		1518644-1520458 c
III	R	HpyLIM6ORF7140P		1520468-1522951 c

III	R	HpyLIM6ORF7755P		1650129-1653041 c
III	M	M.HpyLIM6ORF7755P		1653044-1655005 c

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