Genome Report of Helicobacter pylori Rif1

Helicobacter pylori Rif1

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Putative Helicobacter pylori Rif1 RM systems

GenBank: CP003905 (1,667,883 bp)

Type	Gene	Name	Predicted Rec Seq	Coordinates

I	S	S.HpyRif1ORF2375P		480066-481163 c
I	M	M.HpyRif1ORF2375P		481323-482786 c
I	R	HpyRif1ORF2375P		482779-485946 c

I	S	S.HpyRif1ORF4055P	CTANNNNNNNNTGT	845552-846847 c

I	R	HpyRif1ORF4365P	CTANNNNNNNNTGT	896856-899456 c
I	S	S.HpyRif1ORF4365P	CTANNNNNNNNTGT	899855-901138 c
I	M	M.HpyRif1ORF4365P	CTANNNNNNNNTGT	901131-902840 c

I	R	HpyRif1ORF7260P		1464769-1467747 c
I	M	M.HpyRif1ORF7260P		1467817-1470270
I	S	S.HpyRif1ORF7260P		1470267-1470557

II	M	M1.HpyRif1ORF230P	CCTC	49335-50033 c
II	M	M2.HpyRif1ORF230P	CCTC	50030-51097 c
II	R	HpyRif1ORF230P	CCTC	51094-52264 c

II	R	HpyRif1ORF255P	CCTTC	52459-53718 c
II	M	M.HpyRif1ORF255P	CCTTC	53715-56186 c

II	R	HpyRif1ORF450P	GATC	97256-98089
II	M	M.HpyRif1ORF450P	GATC	98083-98916

II	M	M.HpyRif1ORF1310P	TCGA	269381-270535 c

II	R	HpyRif1ORF1325P	CCGG	271084-271686
II	M	M.HpyRif1ORF1325P	CCGG	271798-272556

II	R	HpyRif1ORF1870P	TCNNGA	376778-377275 c
II	M	M.HpyRif1ORF1870P	TCNNGA	377325-378168 c

II	M	M.HpyRif1ORF2450P	ATTAAT	500135-501772

II	M	M.HpyRif1ORFCP	ACNGT	504447-505369
II	R	HpyRif1ORFCP	ACNGT	505378-505890

II	M	M.HpyRif1ORFDP	ACGT	506149-507138
II	R	HpyRif1ORFDP	ACGT	507140-507892

II	M	M.HpyRif1ORFBP	GTAC	530018-531053
II	R	HpyRif1ORFBP	GTAC	531010-531794

II	RM	HpyRif1ORFAP		715099-719870

II	R	HpyRif1ORF4690P	GTNNAC	960902-961507
II	M	M.HpyRif1ORF4690P	GTNNAC	961488-962639

II	M	M.HpyRif1ORF5790P	GCGC	1187019-1187957 c

II	M	M.HpyRif1ORF6265P	CATG	1285207-1286196 c
II	R	HpyRif1ORF6265P	CATG	1286205-1286723 c

II	R	HpyRif1ORF6985P	GANTC	1411362-1412234 c
II	M	M.HpyRif1ORF6985P	GANTC	1412234-1413313 c

II	RM	HpyRif1ORF6990P		1413457-1417059 c

II	R	HpyRif1ORF7065P	GAAGA	1427704-1428975 c
II	M	M1.HpyRif1ORF7065P	GAAGA	1428991-1429773 c
II	M	M2.HpyRif1ORF7065P	GAAGA	1429760-1430623 c

II	S	S.HpyRif1ORF7640P		1543457-1544650 c
II	RM	HpyRif1ORF7640P		1544716-1546755 c

II	RM	HpyRif1ORFEP	GCGTA	1590664-1594792 c

II	M	M.HpyRif1ORF7980P	TGCA	1614864-1615052
II	R	HpyRif1ORF7980P	TGCA	1615045-1615731

III	R	HpyRif1ORF3065P	GCAG	623239-626181
III	M	M.HpyRif1ORF3065P	GCAG	626178-628052

III	M	M.HpyRif1ORF7075P	TCAG	1430872-1433300
III	R	HpyRif1ORF7075P	TCAG	1433311-1436217

III	R	HpyRif1ORFFP		1597211-1600114 c
III	M	M.HpyRif1ORFFP		1600117-1602053 c

IV	R	HpyRif1GmrSDP		539980-541956

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