Escherichia coli 1008S13 |
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Putative Escherichia coli 1008S13 RM systems
Ref: Gomi,R. unpublished
REBASE ref # 32053
Complete sequence: 4,727,150 bp
GenBank #: CP147053
REBASE acronym: Eco8S13
Org_num: 77205
All begin WAZ53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6105 | endoribonuclease SymE | |||
| 6110 | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.Eco8S13ORF6115P |
| 6115 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.Eco8S13ORF6115P |
| 6120 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | Eco8S13ORF6115P |
| 6125 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 390 | DNA-binding transcriptional regulator Fis | |||
| 395 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco8S13ORF395P |
| 400 | DUF2556 family protein | |||
| 1025 | ribulose-phosphate 3-epimerase | |||
| 1030 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco8S13DamP |
| 1035 | cell division protein DamX | |||
| 7795 | TrmB family transcriptional regulator | |||
| 7800 | M | M.SflLIN17ORF17405P (99% identity) | M.Eco8S13ORF7800P | |
| 7805 | phage holin, lambda family | |||
| 10940 | TraR/DksA family transcriptional regulator | |||
| 10945 | M | M.Eco338ORFBP (100% identity) | GATC | M.Eco8S13ORF10945P |
| 10950 | replication endonuclease | |||
| 14820 | IS66-like element ISEc23 family transposase | |||
| 14825 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco8S13ORF14825P | |
| 14830 | DUF977 family protein | |||
| 16960 | drug/metabolite exporter YedA | |||
| 16965 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.Eco8S13DcmP |
| 16970 | M | M.SflSTLE3DcmP (99% identity) | CCWGG | M.Eco8S13DcmP |
| 16975 | HD domain-containing protein | |||
| 17490 | NinE family protein | |||
| 17495 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco8S13ORF17495P |
| 17500 | recombination protein NinB | |||