Helicobacter pylori P07928 |
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Putative Helicobacter pylori P07928 RM systems
Ref: Choi,J.G. et al. unpublished
REBASE ref # 37993
Complete sequence: 1,559,977 bp
GenBank #: CP141838
REBASE acronym: Hpy928
Org_num: 73862
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Hpy4105ORFLP (97% identity) | ACANNNNNNNTAG | M.Hpy928ORFSP |
| ??? | S | S.Hpyfe73ORF4340P (92% identity) | ACANNNNNNNTAG | S.Hpy928ORFSP |
| ??? | R | HpyK028ORF4135P (97% identity) | ACANNNNNNNTAG | Hpy928ORFSP |
| ??? | R | HpySG26ORF3930P (76% identity) | CCANNNNNNTTA | Hpy928ORFOP |
| ??? | M | M.Hpyfe123ORF5125P (92% identity) | CCANNNNNNTTA | M.Hpy928ORFOP |
| ??? | S | S.HpyJA114ORF2250P (99% identity) | CCANNNNNNTTA | S.Hpy928ORFOP |
| ??? | R | HpyK007VIIIP (98% identity) | Hpy928ORFDP | |
| ??? | M | M.Hpy55ORF1503P (97% identity) | M.Hpy928ORFDP | |
| ??? | S | S.HpyMKF8ORF1454P (60% identity) | S.Hpy928ORFDP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpyK118IP (99% identity) | CATG | Hpy928ORFVP |
| ??? | M | M.HpyK028I (97% identity) | CATG | M.Hpy928ORFVP |
| ??? | M | M.Hpyfe39ORF1895P (96% identity) | GCGC | M.Hpy928ORFUP |
| ??? | R | Hpyfe79ORF2055P (100% identity) | TCNNGA | Hpy928ORFXP |
| ??? | M | M.HpyK052ORF5040P (32% identity) | M.Hpy928ORFXBP | |
| ??? | M | M.HpyK052ORF5040P (68% identity) | M.Hpy928ORFXAP | |
| ??? | M | M.HpyMKF8ORF913P (99% identity) | GTNNAC | M.Hpy928ORFTP |
| ??? | R | Hpy42KORF4720P (98% identity) | GTNNAC | Hpy928ORFTP |
| ??? | R | HpyP96ORFRP (98% identity) | GTAC | Hpy928ORFRP |
| ??? | M | M.HpyTN2ORF9340P (98% identity) | GTAC | M.Hpy928ORFRP |
| ??? | R | Hpyfe33ORF4780P (100% identity) | ACNGT | Hpy928ORFQP |
| ??? | M | M.HpyV002II (100% identity) | ACNGT | M.Hpy928ORFQP |
| ??? | M | M.HpyK053III (99% identity) | ATTAAT | M.Hpy928ORFPP |
| ??? | M | M.Hpyfe97ORF6090P (100% identity) | CCGG | M.Hpy928ORFNP |
| ??? | R | HpyOK303ORFAP (98% identity) | CCGG | Hpy928ORFNP |
| ??? | M | M.HpyK052IX (100% identity) | TCGA | M.Hpy928ORFMP |
| ??? | R | R2.HpyK053ORF940P (97% identity) | R1.Hpy928ORFLP | |
| ??? | R | R1.HpyK053ORF940P (99% identity) | R2.Hpy928ORFLP | |
| ??? | M | M2.HpyK053ORF940P (100% identity) | M1.Hpy928ORFLP | |
| ??? | M | M1.HpyK28ORF990P (99% identity) | M2.Hpy928ORFLP | |
| ??? | M | M.HpyK053XVI (100% identity) | ACGG | M.Hpy928ORFKP |
| ??? | R | Hpyfe93ORF6640P (100% identity) | ACGG | Hpy928ORFKP |
| ??? | M | M.HpyJ012V (97% identity) | GATC | M.Hpy928ORFJP |
| ??? | R | HpyJ009VIIP (96% identity) | GATC | Hpy928ORFJP |
| ??? | M | M2.HpyK053VP (94% identity) | M1.Hpy928ORFIP | |
| ??? | M | M1.HpyK053V (100% identity) | CCTC | M2.Hpy928ORFIP |
| ??? | R | HpyK025VIIP (98% identity) | GANTC | Hpy928ORFGP |
| ??? | M | M.Hpy04ORFNP (99% identity) | GANTC | M.Hpy928ORFGP |
| ??? | RM | HpyDU7AORFWP (92% identity) | Hpy928ORFHP | |
| ??? | R | Hpyfe64ORF7130P (99% identity) | GAAGA | Hpy928ORFFP |
| ??? | M | M2.HpyOK311ORFRP (100% identity) | GAAGA | M1.Hpy928ORFFP |
| ??? | M | M2.Hpy04ORFMP (100% identity) | GAAGA | M2.Hpy928ORFFP |
| ??? | R | HpyK053XIIIP (100% identity) | TGCA | Hpy928ORFEP |
| ??? | M | M.HpyLI25V (98% identity) | TGCA | M.Hpy928ORFEP |
| ??? | RM | Hpyfe64ORF50P (92% identity) | Hpy928ORFBP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | Hpy53ORFLP (95% identity) | CCTAA | Hpy928ORFWP |
| ??? | M | M.HpyK025ORF6685P (96% identity) | CCTAA | M.Hpy928ORFWP |
| ??? | M | M.Hpyfe63ORF40P (96% identity) | M.Hpy928ORFCP | |
| ??? | R | Hpybs2ORFD1P (95% identity) | Hpy928ORFCP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpyTW18GmrSD2P (96% identity) | Hpy928GmrSD2P | |
| ??? | R | HpyK041GmrSDP (75% identity) | Hpy928GmrSDP | |