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Putative Escherichia coli JNE120393 RM systems
Ref: Kubomura,A. et al. unpublished
REBASE ref # 36930
Sequence length: | GenBank #: | |
Chromosome: | 5,072,830 bp | AP027246 |
plasmid pJNE120393-1: | 160,690 bp | AP027247 |
REBASE acronym: Eco393
Org_num: 67987
All begin JNE120393_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
25280 | 60 aa hypothetical protein | |||
25290 | M | M.Ecostr10ORF18570P (100% identity) | M.Eco393ORF25290P | |
25300 | S | S.Ecostr10ORF18570P (100% identity) | S.Eco393ORF25290P | |
25310 | 81 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1450 | HD superfamily phosphohydrolase | |||
1460 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco393DcmP |
1470 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco393DcmP |
1480 | amino acid exporter for phenylalanine | |||
9050 | 142 aa hypothetical protein | |||
9060 | M | M.Ecostr10ORF2400P (100% identity) | M.Eco393ORF9060P | |
9070 | 65 aa hypothetical protein | |||
10720 | repressor | |||
10730 | M | M.Ecostr10ORF1530P (100% identity) | GATC | M.Eco393ORF10730P |
10740 | 57 aa hypothetical protein | |||
11600 | Shiga toxin 2 subunit A | |||
11610 | M | M.Eco7807ORF540P (100% identity) | M.Eco393ORF11610P | |
11620 | 65 aa hypothetical protein | |||
13680 | Shiga toxin 2 subunit A | |||
13690 | M | M.EcoAVFP2ORFAP (100% identity) | M.Eco393ORF13690P | |
13700 | 65 aa hypothetical protein | |||
25160 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
25170 | R | Ecostr10ORF18645P (100% identity) | Eco393ORF25170P | |
25180 | 332 aa hypothetical protein | |||
25210 | ATPase-like protein | |||
25220 | RM | Ecostr10ORF18620P (100% identity) | Eco393ORF25220P | |
25230 | alkaline phosphatase | |||
34540 | cell division protein DamX | |||
??? | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco393DamP |
34560 | D-ribulose-5-phosphate 3-epimerase | |||
47830 | replication protein | |||
47840 | R | Ecostr10ORF20P (100% identity) | GRGCYC | Eco393ORF47860P |
47850 | C | C.Ecostr10ORF20P (100% identity) | C.Eco393ORF47860P | |
47860 | M | M.EcoST130ORF15675P (90% identity) | GRGCYC | M.Eco393ORF47860P |
47870 | phage portal protein | |||
plasmid pJNE120393-1 | ||||
48750 | 308 aa hypothetical protein | |||
48760 | M | M.Sso128ORF27515P (100% identity) | SAY | M.Eco393ORF48760P |
48770 | 73 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
10310 | 54 aa hypothetical protein | |||
10320 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco393ORF10320P |
10330 | DNA-invertase | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
16240 | phage protein NinF | |||
16250 | M | M.SflLIN11ORF7170P (100% identity) | GATC | M.Eco393ORF16250P |
16260 | recombination protein |