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Putative Klebsiella pneumoniae CPE16 RM systems
Ref: Element,S.J. et al. bioRxiv (2023)
REBASE ref # 36151
Sequence length: | GenBank #: | |
Chromosome: | 5,293,517 bp | CP115707 |
plasmid pCPE16_2: | 248,840 bp | CP115708 |
plasmid pCPE16_3: | 119,165 bp | CP115709 |
REBASE acronym: KpnCPE16
Org_num: 64935
All begin PGD48_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1320 | helix-turn-helix domain-containing protein | |||
1325 | R | Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | KpnCPE16ORF1350P |
1330 | histidinol-phosphatase | |||
1335 | DNA binding domain-containing protein | |||
1340 | S | S.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | S.KpnCPE16ORF1350P |
1345 | AAA family ATPase | |||
1350 | M | M.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | M.KpnCPE16ORF1350P |
1355 | 400 aa hypothetical protein | |||
22770 | S | S.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | S.KpnCPE16ORF22775P |
22775 | M | M.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | M.KpnCPE16ORF22775P |
22780 | R | Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | KpnCPE16ORF22775P |
22785 | integrase arm-type DNA-binding domain-containing | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1855 | cell division protein DamX | |||
1860 | M | M.Kpnst68DamP (100% identity) | GATC | M.KpnCPE16DamP |
1865 | ribulose-phosphate 3-epimerase | |||
8990 | phosphohydrolase | |||
8995 | M | M.Kpnst69DcmP (100% identity) | CCWGG | M.KpnCPE16DcmP |
9000 | V | V.KspC31DcmP (75% identity) | CCWGG | V.KpnCPE16DcmP |
9005 | drug/metabolite exporter YedA | |||
9270 | 75 aa hypothetical protein | |||
9275 | M | M.Kpnst68ORF20290P (100% identity) | GATC | M.KpnCPE16ORF9275P |
9280 | YqaJ viral recombinase family protein | |||
15880 | replication endonuclease | |||
15885 | M | M.Kpnst68ORF1125P (100% identity) | GATC | M.KpnCPE16ORF15885P |
15890 | 3-5 exoribonuclease | |||
plasmid pCPE16_2 | ||||
26875 | DNA replication protein DnaC | |||
26880 | M | M.Kqu645ORF52040P (100% identity) | CCWGG | M.KpnCPE16ORF26880P |
26885 | R | Kpnst68ORF27050P (100% identity) | CCWGG | KpnCPE16ORF26880P |
26890 | 82 aa hypothetical protein | |||
26960 | 252 aa hypothetical protein | |||
26965 | M | M.Kqu610ORF26075P (100% identity) | M.KpnCPE16ORF26965P | |
26970 | 1126 aa hypothetical protein | |||
plasmid pCPE16_3 | ||||
27320 | 56 aa hypothetical protein | |||
27325 | M | M.SmaQC11ORF52800P (100% identity) | M.KpnCPE16ORF27325P | |
27330 | 73 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
22750 | IS3 family transposase | |||
22755 | R | Ksp4251MrrP (100% identity) | KpnCPE16MrrP | |
22760 | STY4851/ECs_5259 family protein |