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Putative Neisseria gonorrhoeae 10231 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,212,810 bp
GenBank #: CP107264
REBASE acronym: Ngo10231
Org_num: 63076
All begin NDN57_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3545 | replication-associated recombination protein A | |||
3550 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo10231ORF3575P |
3555 | hydroxyacid dehydrogenase | |||
3560 | S | S.Ngo10814ORF3580P (100% identity) | GAGNNNNNTAC | S.Ngo10231ORF3575P |
3565 | 186 aa hypothetical protein | |||
3570 | 280 aa hypothetical protein | |||
3575 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo10231ORF3575P |
3580 | ABC transporter | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
30 | leucine--tRNA ligase | |||
35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10231ORF40P |
??? | M | M.NgoWSORF8P (100% identity) | GATC | M.Ngo10231ORF40P |
45 | 184 aa hypothetical protein | |||
1530 | phenylalanine--tRNA ligase subunit alpha | |||
1535 | V | V.NgoWSORF391P (100% identity) | V.Ngo10231ORF1540P | |
??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10231ORF1540P |
1550 | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo10231ORF1540P |
1555 | phenylalanine--tRNA ligase subunit beta | |||
1825 | IS1595 family transposase | |||
1830 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo10231ORF1830P |
1835 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo10231ORF1830P |
1840 | 140 aa hypothetical protein | |||
1860 | uroporphyrinogen decarboxylase | |||
1865 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo10231ORF1875P | |
1870 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10231ORF1875P |
1875 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10231ORF1875P |
1880 | DNA repair protein RadA | |||
3435 | 3-isopropylmalate dehydrogenase | |||
3440 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo10231ORF3445P |
3445 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10231ORF3445P |
3450 | 3-isopropylmalate dehydratase small subunit | |||
4735 | anthranilate synthase component I | |||
4740 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10231ORF4740P |
4745 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo10231ORF4740P |
4750 | 5-(carboxyamino)imidazole ribonucleotide | |||
6010 | replication initiation factor domain-containing | |||
6015 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10231ORF6030P | |
??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10231ORF6030P |
??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10231ORF6030P |
6040 | 48 aa hypothetical protein | |||
9510 | FUSC family protein | |||
??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo10231ORF9525P |
9525 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo10231ORF9525P |
9530 | ribosome recycling factor | |||
10055 | IS5/IS1182 family transposase | |||
10060 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10231ORF10065P |
10065 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo10231ORF10065P |
10070 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo10231ORF10065P |
10075 | RNA-binding transcriptional accessory protein | |||
10605 | GTPase ObgE | |||
10610 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10231ORF10610P |
10615 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10231ORF10610P |
10620 | cysteine--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2790 | peptidylprolyl isomerase | |||
2795 | M | M.NgoFQ20ORF3215P (100% identity) | CCACC | M.Ngo10231ORF2795P |
2800 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo10231ORF2795P |
2805 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
3250 | alpha-hydroxy-acid oxidizing protein | |||
3255 | R | NgoFA19ORF379P (100% identity) | ACACC | Ngo10231ORF3260P |
3260 | M | M.Ngo9126ORF3235BP (100% identity) | ACACC | M.Ngo10231ORF3260BP |
3265 | M | M2.Ngo10795ORF3270P (100% identity) | ACACC | M.Ngo10231ORF3260AP |
3270 | tRNA pseudouridine(55) synthase TruB |