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Putative Klebsiella pneumoniae KPA3 RM systems
Ref: Pachanon,R. et al. unpublished
REBASE ref # 35017
Sequence length: | GenBank #: | |
Chromosome: | 5,272,495 bp | CP102993 |
plasmid p1: | 175,819 bp | CP102994 |
plasmid p2: | 121,101 bp | CP102995 |
REBASE acronym: KpnKPA3
Org_num: 61636
All begin NW255_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3140 | IS1-like element IS1B family transposase | |||
3145 | R | Kpnu34ORF4855P (89% identity) | KpnKPA3ORF3155P | |
3150 | S | S1.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | S1.KpnKPA3ORF3155P |
3155 | M | M.Kpnu34ORF4855P (100% identity) | M.KpnKPA3ORF3155P | |
3160 | S | S2.Kpnu34ORF4855P (100% identity) | S2.KpnKPA3ORF3155P | |
3165 | AAA family ATPase | |||
22870 | S | S.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | S.KpnKPA3ORF22875P |
22875 | M | M.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | M.KpnKPA3ORF22875P |
22880 | R | Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | KpnKPA3ORF22875P |
22885 | integrase arm-type DNA-binding domain-containing | |||
plasmid p1 | ||||
26230 | M48 family metallopeptidase | |||
26235 | R | SmaQC11ORF51970P (100% identity) | GATGNNNNNNTTG | KpnKPA3ORF26250P |
26240 | YecA family protein | |||
26245 | S | S.Kva2757ORF27000P (100% identity) | GATGNNNNNNTTG | S.KpnKPA3ORF26250P |
26250 | M | M.SmaQC11ORF51970P (100% identity) | GATGNNNNNNTTG | M.KpnKPA3ORF26250P |
26255 | IS1 family transposase | |||
plasmid p2 | ||||
26990 | DUF262 domain-containing protein | |||
26995 | M | M.Pge386ORF25140P (100% identity) | CTANNNNNNCTG | M.KpnKPA3ORF26995P |
27000 | S | S.Kqu688ORF26145P (100% identity) | CTANNNNNNCTG | S.KpnKPA3ORF26995P |
27005 | R | Kqu688ORF26145P (100% identity) | CTANNNNNNCTG | KpnKPA3ORF26995P |
27010 | 71 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1785 | cell division protein DamX | |||
1790 | M | M.KspK4DamP (100% identity) | GATC | M.KpnKPA3DamP |
1795 | ribulose-phosphate 3-epimerase | |||
5875 | TraR/DksA family transcriptional regulator | |||
5880 | M | M.Kpnu34ORF7640P (100% identity) | GATC | M.KpnKPA3ORF5880P |
5885 | replication endonuclease | |||
8750 | phosphohydrolase | |||
8755 | M | M.Ksp54798DcmP (77% identity) | M1.KpnKPA3ORF8755P | |
8760 | M | M2.Kpn80319ORFGP (98% identity) | M2.KpnKPA3ORF8755P | |
8765 | R | Kox71ORF15465P (96% identity) | KpnKPA3ORF8755P | |
8770 | integrase core domain-containing protein | |||
8845 | site-specific integrase | |||
8850 | M | M.Ksp1954ORF23690P (21% identity) | M.KpnKPA3DcmP | |
8855 | V | V.KspC31DcmP (75% identity) | CCWGG | V.KpnKPA3DcmP |
8860 | drug/metabolite exporter YedA | |||
9690 | dcm methylase | |||
9695 | M | M.Rte1ORF21045P (100% identity) | M.KpnKPA3ORF9695P | |
9700 | DUF1317 domain-containing protein | |||
19425 | DUF1317 domain-containing protein | |||
19430 | M | M.KpnY01ORF9760P (100% identity) | M.KpnKPA3ORF19430P | |
19435 | dcm methylase | |||
plasmid p1 | ||||
26620 | 73 aa hypothetical protein | |||
26625 | M | M.SmaBWH35ORF25885P (100% identity) | M.KpnKPA3ORF26625P | |
26630 | 56 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
22850 | IS3 family transposase | |||
22855 | R | Ksp4251MrrP (100% identity) | KpnKPA3MrrP | |
22860 | STY4851/ECs_5259 family protein |