|
Putative Klebsiella pneumoniae isolate 326 RM systems
Ref: Alioto,T. et al. unpublished
REBASE ref # 33419
Sequence length: | GenBank #: | |
chromosome main: | 5,445,481 bp | OW849289 |
chromosome main: | 5,263,462 bp | OW849350 |
chromosome main: | 5,323,918 bp | OW995946 |
chromosome main: | 5,448,387 bp | OW849451 |
chromosome main: | 5,364,299 bp | OW969755 |
plasmid P2: | 66,509 bp | OW849352 |
plasmid P2: | 83,793 bp | OW969757 |
plasmid P3: | 56,855 bp | OW849292 |
plasmid P3: | 53,249 bp | OW849454 |
plasmid P5: | 4,867 bp | OW849456 |
plasmid P6: | 4,867 bp | OW849295 |
REBASE acronym:
Org_num:
All begin AI2675V1_, AI2675V1_REPA, AI2681V1_, AI2681V1_REPA, AI2686V1_, AI2686V1_REPA, AI2952V1_, AI2952V1_REPA, AI3036V1_, AI3036V1_REPA
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome main | ||||
637 | 615 aa hypothetical protein | |||
638 | R | Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | Kpn326ORF640P |
639 | S | S1.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | S.Kpn326ORF640P |
640 | M | M.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | M.Kpn326ORF640P |
641 | 190 aa hypothetical protein | |||
??? | S | S.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | S.Kpn326ORF4392P |
4392 | M | M.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | M.Kpn326ORF4392P |
4393 | R | Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | Kpn326ORF4392P |
4394 | Prophage integrase IntA | |||
chromosome main | ||||
636 | 615 aa hypothetical protein | |||
637 | R | Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | Kpn326bORF639P |
638 | S | S1.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | S.Kpn326bORF639P |
639 | M | M.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | M.Kpn326bORF639P |
640 | 190 aa hypothetical protein | |||
??? | S | S.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | S.Kpn326bORF4269P |
4269 | M | M.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | M.Kpn326bORF4269P |
4270 | R | Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | Kpn326bORF4269P |
4271 | Prophage integrase IntA | |||
chromosome main | ||||
648 | 615 aa hypothetical protein | |||
649 | R | Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | Kpni326eORF651P |
650 | S | S1.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | S.Kpni326eORF651P |
651 | M | M.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | M.Kpni326eORF651P |
652 | 190 aa hypothetical protein | |||
??? | S | S.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | S.Kpni326eORF4326P |
4326 | M | M.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | M.Kpni326eORF4326P |
4327 | R | Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | Kpni326eORF4326P |
4328 | Prophage integrase IntA | |||
chromosome main | ||||
637 | 615 aa hypothetical protein | |||
638 | R | Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | Kpn326aORF640P |
639 | S | S1.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | S.Kpn326aORF640P |
640 | M | M.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | M.Kpn326aORF640P |
641 | 190 aa hypothetical protein | |||
??? | S | S.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | S.Kpn326aORF4396P |
4396 | M | M.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | M.Kpn326aORF4396P |
4397 | R | Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | Kpn326aORF4396P |
4398 | Prophage integrase IntA | |||
chromosome main | ||||
637 | 615 aa hypothetical protein | |||
638 | R | Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | Kpn326cORF640P |
639 | S | S1.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | S.Kpn326cORF640P |
640 | M | M.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | M.Kpn326cORF640P |
641 | 190 aa hypothetical protein | |||
??? | S | S.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | S.Kpn326cORF4357P |
4357 | M | M.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | M.Kpn326cORF4357P |
4358 | R | Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | Kpn326cORF4357P |
4359 | Prophage integrase IntA | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome main | ||||
344 | Cell division protein DamX | |||
345 | M | M.KspK4DamP (100% identity) | GATC | M.Kpn326DamP |
346 | Ribulose-phosphate 3-epimerase | |||
1652 | 235 aa hypothetical protein | |||
1653 | M | M.Ksp1954ORF23690P (97% identity) | CCWGG | M.Kpn326DcmP |
1654 | V | V.KspC31DcmP (75% identity) | V.Kpn326DcmP | |
1655 | inner membrane transporter YedA | |||
2907 | 662 aa hypothetical protein | |||
2908 | M | M.Kpnst68ORF1125P (100% identity) | GATC | M.Kpn326ORF2908P |
2909 | 75 aa hypothetical protein | |||
3126 | 76 aa hypothetical protein | |||
3127 | M | M.Kpni326eORF3134P (100% identity) | M.Kpn326ORF3127P | |
3128 | 44 aa hypothetical protein | |||
4243 | 890 aa hypothetical protein | |||
4244 | RM | Kpn326aORF4248BP (100% identity) | Kpn326ORF4244BP | |
32 | unnamed protein product | |||
6 | pseudogene | |||
4245 | 276 aa hypothetical protein | |||
35 | pseudogene | |||
4246 | 87 aa hypothetical protein | |||
4247 | RM | Kpn326aORF4248AP (100% identity) | Kpn326ORF4244AP | |
4248 | 587 aa hypothetical protein | |||
4612 | HTH-type transcriptional regulator RamB | |||
4613 | M | M.KquSNI47ORF46740P (100% identity) | M.Kpn326ORF4613P | |
4614 | 121 aa hypothetical protein | |||
chromosome main | ||||
343 | Cell division protein DamX | |||
344 | M | M.KspK4DamP (100% identity) | GATC | M.Kpn326bDamP |
345 | Ribulose-phosphate 3-epimerase | |||
1650 | 235 aa hypothetical protein | |||
1651 | M | M.Ksp1954ORF23690P (97% identity) | CCWGG | M.Kpn326bDcmP |
1652 | V | V.KspC31DcmP (75% identity) | V.Kpn326bDcmP | |
1653 | inner membrane transporter YedA | |||
2904 | 715 aa hypothetical protein | |||
2905 | M | M.Kpnst68ORF1125P (100% identity) | GATC | M.Kpn326bORF2905P |
2906 | 75 aa hypothetical protein | |||
3123 | 76 aa hypothetical protein | |||
3124 | M | M.Kpni326eORF3134P (100% identity) | M.Kpn326bORF3124P | |
3125 | 44 aa hypothetical protein | |||
chromosome main | ||||
355 | Cell division protein DamX | |||
356 | M | M.KspK4DamP (100% identity) | GATC | M.Kpni326eDamP |
357 | Ribulose-phosphate 3-epimerase | |||
1657 | 235 aa hypothetical protein | |||
1658 | M | M.Ksp1954ORF23690P (97% identity) | CCWGG | M.Kpni326eDcmP |
1659 | V | V.KspC31DcmP (75% identity) | V.Kpni326eDcmP | |
1660 | inner membrane transporter YedA | |||
2914 | 715 aa hypothetical protein | |||
2915 | M | M.Kpnst68ORF1125P (100% identity) | GATC | M.Kpni326eORF2915P |
2916 | 75 aa hypothetical protein | |||
3133 | 76 aa hypothetical protein | |||
3134 | M | M.KpnS1329ORF4115P (100% identity) | M.Kpni326eORF3134P | |
3135 | 44 aa hypothetical protein | |||
chromosome main | ||||
344 | Cell division protein DamX | |||
345 | M | M.KspK4DamP (100% identity) | GATC | M.Kpn326aDamP |
346 | Ribulose-phosphate 3-epimerase | |||
1652 | 235 aa hypothetical protein | |||
1653 | M | M.Ksp1954ORF23690P (97% identity) | CCWGG | M.Kpn326aDcmP |
1654 | V | V.KspC31DcmP (75% identity) | V.Kpn326aDcmP | |
1655 | inner membrane transporter YedA | |||
2907 | 715 aa hypothetical protein | |||
2908 | M | M.Kpnst68ORF1125P (100% identity) | GATC | M.Kpn326aORF2908P |
2909 | 75 aa hypothetical protein | |||
3128 | 76 aa hypothetical protein | |||
3129 | M | M.KvaN56ORF17165P (100% identity) | M.Kpn326aORF3129P | |
3130 | 44 aa hypothetical protein | |||
4247 | 890 aa hypothetical protein | |||
4248 | RM | Kpn326ORF4244BP (100% identity) | Kpn326aORF4248BP | |
37 | unnamed protein product | |||
7 | pseudogene | |||
4249 | 276 aa hypothetical protein | |||
40 | pseudogene | |||
4250 | 87 aa hypothetical protein | |||
4251 | RM | Kpn326ORF4244AP (100% identity) | Kpn326aORF4248AP | |
4252 | 587 aa hypothetical protein | |||
4616 | HTH-type transcriptional regulator RamB | |||
4617 | M | M.KquSNI47ORF46740P (100% identity) | M.Kpn326aORF4617P | |
4618 | 121 aa hypothetical protein | |||
chromosome main | ||||
1648 | 235 aa hypothetical protein | |||
1649 | M | M.Ksp1954ORF23690P (97% identity) | CCWGG | M.Kpn326cDcmP |
1650 | V | V.KspC31DcmP (75% identity) | V.Kpn326cDcmP | |
1651 | inner membrane transporter YedA | |||
2901 | 662 aa hypothetical protein | |||
2902 | M | M.Kpnst68ORF1125P (100% identity) | GATC | M.Kpn326cORF2902P |
2903 | 75 aa hypothetical protein | |||
3120 | 76 aa hypothetical protein | |||
3121 | M | M.Kpni326eORF3134P (100% identity) | M.Kpn326cORF3121P | |
3122 | 44 aa hypothetical protein | |||
4620 | 121 aa hypothetical protein | |||
4621 | M | M.KquSNI47ORF46740P (100% identity) | M.Kpn326cORF4621P | |
4622 | HTH-type transcriptional regulator RamB | |||
plasmid P2 | ||||
166 | 293 aa hypothetical protein CJD35_20465 | |||
5107 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpn326bORF5108P |
5108 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpn326bORF5108P |
5109 | 88 aa hypothetical protein | |||
plasmid P2 | ||||
189 | 147 aa hypothetical protein SK90_05319, partial | |||
5206 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpn326cORF5207P |
5207 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpn326cORF5207P |
5208 | 88 aa hypothetical protein | |||
plasmid P3 | ||||
133 | 293 aa hypothetical protein CJD35_20465 | |||
5346 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpn326ORF5347P |
5347 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpn326ORF5347P |
5348 | 88 aa hypothetical protein | |||
plasmid P3 | ||||
135 | 293 aa hypothetical protein CJD35_20465 | |||
5346 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpn326aORF5347P |
5347 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpn326aORF5347P |
5348 | 88 aa hypothetical protein | |||
plasmid P5 | ||||
5367 | 71 aa hypothetical protein | |||
5368 | M | M.Kpn326ORF5370P (100% identity) | M.Kpn326aORF5368P | |
??? | R | Sen71968ORF23930P (100% identity) | Kpn326aORF5368P | |
plasmid P6 | ||||
5370 | M | M.Kpn326aORF5368P (100% identity) | M.Kpn326ORF5370P | |
5371 | 71 aa hypothetical protein | |||
5372 | 161 aa hypothetical protein | |||
5373 | Mobilization protein MbeC | |||
??? | R | Sen71968ORF23930P (100% identity) | Kpn326ORF5370P | |
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome main | ||||
12 | IS3 family transposase | |||
4319 | R | Ksp4251MrrP (100% identity) | Kpni326eMrrP | |
4320 | 904 aa hypothetical protein |