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Putative Klebsiella quasipneumoniae SWHEFF_72 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
Sequence length: | GenBank #: | |
Chromosome: | 5,362,660 bp | CP055010 |
plasmid unnamed1: | 274,085 bp | CP055011 |
plasmid unnamed2: | 234,910 bp | CP055012 |
plasmid unnamed3: | 167,218 bp | CP055013 |
REBASE acronym: KpnFF72
Org_num: 55412
All begin HUZ79_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
plasmid unnamed2 | ||||
28285 | cation-transporting P-type ATPase | |||
28290 | M | M1.KquBL05ORF31400P (99% identity) | M.KpnFF72ORF28290P | |
28295 | AAA family ATPase | |||
28300 | S | S2.KquBL05ORF31400P (100% identity) | S.KpnFF72ORF28290P | |
28305 | DNA binding domain-containing protein | |||
28310 | histidinol-phosphatase | |||
28315 | R | PaeCF13ORF2175P (100% identity) | KpnFF72ORF28290P | |
28320 | helix-turn-helix domain-containing protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1795 | cell division protein DamX | |||
1800 | M | M.KvaHKUDamP (100% identity) | GATC | M.KpnFF72DamP |
1805 | ribulose-phosphate 3-epimerase | |||
8860 | phosphohydrolase | |||
8865 | M | M.Kqu21223ORF8550P (100% identity) | CCWGG | M.KpnFF72ORF8865P |
8870 | V | V.KquFF28ORF8370P (100% identity) | V.KpnFF72ORF8865P | |
8875 | drug/metabolite exporter YedA | |||
13695 | 199 aa hypothetical protein | |||
13700 | M | M.Kpn142ORF4290P (98% identity) | M.KpnFF72ORF13700P | |
13705 | dcm methylase | |||
15585 | replication endonuclease | |||
15590 | M | M.Kpn1301ORFAP (99% identity) | M.KpnFF72ORF15590P | |
15595 | 3-5 exoribonuclease | |||
19750 | YqaJ viral recombinase family protein | |||
19755 | M | M.Kpns66ORF7190P (99% identity) | M.KpnFF72ORF19755P | |
19760 | dcm methylase | |||
23045 | glycoside hydrolase family 43 protein | |||
23050 | R | KquPF26ORF22440P (99% identity) | KpnFF72ORF23050P | |
23055 | RelA/SpoT domain-containing protein | |||
plasmid unnamed1 | ||||
27470 | DNA replication protein DnaC | |||
27475 | M | M.Ksp1927ORF27750P (100% identity) | M.KpnFF72ORF27475P | |
27480 | R | Sen20597ORF9325P (100% identity) | CCWGG | KpnFF72ORF27475P |
27485 | 82 aa hypothetical protein | |||
27550 | 168 aa hypothetical protein | |||
27555 | M | M.SflN92ORF24190P (100% identity) | M.KpnFF72ORF27555P | |
27560 | 1126 aa hypothetical protein | |||
plasmid unnamed2 | ||||
28110 | 100 aa hypothetical protein | |||
28115 | M | M.Sen1271ORF23350P (100% identity) | M.KpnFF72ORF28115P | |
28120 | 143 aa hypothetical protein | |||
plasmid unnamed3 | ||||
29440 | 76 aa hypothetical protein | |||
29445 | M | M.SmaQC11ORF52800P (100% identity) | M.KpnFF72ORF29445P | |
29450 | 73 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
8740 | prepilin-type N-terminal cleavage/methylation | |||
8745 | R | Eco21EVAORFEP (99% identity) | CCGAG | KpnFF72ORF8750P |
8750 | M | M.KpnYI2ORF1833P (100% identity) | CCGAG | M.KpnFF72ORF8750P |
8755 | SpnT protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
plasmid unnamed3 | ||||
29305 | IS5 family transposase | |||
29310 | R | RorCRE01McrC2P (100% identity) | KpnFF72McrCP | |
29315 | R | Rte104AMcrBP (100% identity) | KpnFF72McrBP | |
29320 | IS3-like element ISKpn38 family transposase |