|
Putative Escherichia coli B16EC0557 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
Sequence length: | GenBank #: | |
Chromosome: | 5,249,057 bp | CP088790 |
plasmid pB16EC0557-2: | 95,231 bp | CP088792 |
plasmid pB16EC0557-3: | 69,390 bp | CP088793 |
REBASE acronym: EcoC0557
Org_num: 53609
All begin LQT49_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5070 | type IV toxin-antitoxin system AbiEi family | |||
5075 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0557ORF5080P |
5080 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0557ORF5080P |
5085 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0557ORF5080P |
5090 | ash family protein | |||
6890 | restriction endonuclease | |||
6895 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0557ORF6895P |
6900 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0557ORF6895P |
6905 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0557ORF6895P |
6910 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1385 | helix-turn-helix domain-containing protein | |||
1390 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0557ORF1390P | |
1395 | 71 aa hypothetical protein | |||
7230 | McrC family protein | |||
7235 | R | EcosS9ORF2810P (90% identity) | GGTCTC | EcoC0557ORF7240P |
7240 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0557ORF7240P |
7245 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0557ORF7240P |
7250 | helix-turn-helix domain-containing protein | |||
8535 | response regulator receiver domain | |||
8540 | R | EcosS3ORF15775P (100% identity) | EcoC0557ORF8545P | |
8545 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0557ORF8545P | |
8550 | conjugal transfer protein TraG N-terminal | |||
13000 | cell division protein DamX | |||
13005 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0557DamP |
13010 | ribulose-phosphate 3-epimerase | |||
13600 | DUF2556 family protein | |||
13605 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0557ORF13605P |
13610 | DNA-binding transcriptional regulator Fis | |||
17950 | DUF1382 family protein | |||
17955 | M | M.Eho218ORF16395P (100% identity) | GATC | M.EcoC0557ORF17955P |
17960 | PerC family transcriptional regulator | |||
21375 | phosphohydrolase | |||
21380 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0557DcmP |
21385 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0557DcmP |
21390 | drug/metabolite exporter YedA | |||
24905 | DUF3927 family protein | |||
24920 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0557ORF24920P |
24925 | TrmB family transcriptional regulator | |||
plasmid pB16EC0557-2 | ||||
26080 | 73 aa hypothetical protein | |||
26085 | M | M.Sso80ORF24890P (100% identity) | M.EcoC0557ORF26085P | |
26090 | 103 aa hypothetical protein | |||
plasmid pB16EC0557-3 | ||||
26995 | 97 aa hypothetical protein | |||
27000 | M | M.Ssop356ORFAP (100% identity) | M.EcoC0557ORF27000P | |
27005 | 73 aa hypothetical protein |