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Putative Limosilactobacillus fermentum GR1008 RM systems
Ref: Chen,Y.-T. unpublished
REBASE ref # 32088
Complete sequence: 2,237,764 bp
GenBank #: CP071000
REBASE acronym: Lfe1008
Org_num: 48143
All begin JYQ65_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
9010 | 76 aa hypothetical protein | |||
9015 | R | Lfe8633ORFDP (100% identity) | Lfe1008ORF9045P | |
9020 | IS30 family transposase | |||
9025 | S | S3.Lfe8633ORFDP (100% identity) | S3.Lfe1008ORF9045P | |
9030 | S | S2.LfePCCORF9125P (100% identity) | S2.Lfe1008ORF9045P | |
9035 | tyrosine-type recombinase/integrase | |||
9040 | S | S1.LfePCCORF9125P (100% identity) | S1.Lfe1008ORF9045P | |
9045 | M | M.LfePCCORF9125P (100% identity) | M.Lfe1008ORF9045P | |
9050 | C | C.LfeU21ORF8450P (100% identity) | C.Lfe1008ORF9045P | |
9055 | 298 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2195 | BREX system P-loop protein BrxC | |||
2200 | RM | LfePCCORF2220P (100% identity) | Lfe1008ORF2200P | |
2205 | site-specific integrase | |||
2205 | site-specific integrase | |||
2210 | RM | LfePCCORF2230P (100% identity) | Lfe1008ORF2210P | |
2215 | BREX-1 system phosphatase PglZ type A | |||
9125 | P27 family phage terminase small subunit | |||
9130 | M | M.LfePCCORF9210AP (100% identity) | M.Lfe1008ORF9130AP | |
9135 | IS3 family transposase | |||
9140 | transposase | |||
??? | M | M.LfePCCORF9210BP (100% identity) | M.Lfe1008ORF9130BP | |
9150 | 206 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
9950 | nucleotide pyrophosphohydrolase | |||
??? | R | Lfe1007ORF10000P (100% identity) | Lfe1008ORF9955P | |
9960 | (deoxy)nucleoside triphosphate |