|
Putative Escherichia coli O145 RM8995-C1 RM systems
Ref: Carter,M.Q. and Pham,A.C. unpublished
REBASE ref # 29329
Sequence length: | GenBank #: | |
Chromosome: | 5,457,980 bp | CP031355 |
plasmid pRM8995-C1: | 88,747 bp | CP031354 |
REBASE acronym: Eco8995
Org_num: 44684
All begin DXE49_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
9495 | M48 family metallopeptidase | |||
9500 | R | EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | Eco8995ORF9520P |
9505 | cold shock domain-containing protein | |||
9510 | YecA family protein | |||
9515 | S | S.EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | S.Eco8995ORF9520P |
9520 | M | M.EcoSO173ORF28895P (85% identity) | GATGNNNNNNTAC | M.Eco8995ORF9520P |
9525 | protein sbmA | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
6350 | recombination protein NinB | |||
6355 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco8995ORF6355P |
6360 | NinE family protein | |||
7645 | DUF1737 domain-containing protein | |||
7655 | M | M.EcoTWORF1742P (100% identity) | M.Eco8995ORF7655P | |
7660 | TrmB family transcriptional regulator | |||
10095 | drug/metabolite exporter YedA | |||
10100 | V | V.SsoSE61DcmP (100% identity) | V.Eco8995DcmP | |
10105 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco8995DcmP |
10110 | phosphohydrolase | |||
12890 | Com family DNA-binding transcriptional | |||
12895 | M | M.EcoM9ORF12010P (100% identity) | M.Eco8995ORF12895P | |
12900 | 4-phosphoerythronate dehydrogenase | |||
17910 | NinE family protein | |||
17915 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco8995ORF4430P |
17920 | IS3-like element IS629 family transposase | |||
21160 | DNA-binding transcriptional regulator Fis | |||
??? | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco8995ORF21165P |
21170 | DUF2556 domain-containing protein | |||
21695 | ribulose-phosphate 3-epimerase | |||
21700 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco8995DamP |
21705 | cell division protein DamX | |||
24920 | 77 aa hypothetical protein | |||
24925 | M | M.SflFF35ORF20P (100% identity) | M.Eco8995ORF24925P | |
24930 | 330 aa hypothetical protein | |||
27285 | 59 aa hypothetical protein | |||
27290 | R | EcoE115ORF5147P (100% identity) | Eco8995ORF27290P | |
27295 | N-acetylneuraminate epimerase | |||
27325 | DEAD/DEAH box helicase | |||
27330 | RM | EcoE115ORF5155P (100% identity) | Eco8995ORF27330P | |
27335 | IS3-like element IS629 family transposase | |||
plasmid pRM8995-C1 | ||||
235 | 72 aa hypothetical protein | |||
240 | M | M.EcopO26ORF185P (100% identity) | SAY | M.Eco8995ORF240P |
245 | 102 aa hypothetical protein |