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Putative Escherichia coli O157:H7 N8B7-2 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
Sequence length: | GenBank #: | |
Chromosome: | 5,504,820 bp | CP038333 |
plasmid pN8B7-1: | 94,694 bp | CP038335 |
REBASE acronym: EcoN8B72
Org_num: 40042
All begin E4U68_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
24975 | DUF262 domain-containing protein | |||
24980 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoN8B72ORF24985P |
24985 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoN8B72ORF24985P |
24990 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoN8B72ORF24985P |
24995 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2340 | cell division protein DamX | |||
2345 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoN8B72DamP |
2350 | ribulose-phosphate 3-epimerase | |||
2865 | DUF2556 domain-containing protein | |||
2870 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoN8B72ORF2870P |
2875 | DNA-binding transcriptional regulator Fis | |||
10220 | recombination protein NinB | |||
10225 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoN8B72ORF10225P |
10230 | NinE family protein | |||
12940 | TrmB family transcriptional regulator | |||
12945 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoN8B72ORF12945P | |
12960 | 61 aa hypothetical protein | |||
17735 | drug/metabolite exporter YedA | |||
17740 | V | V.EcosPA8DcmP (100% identity) | V.EcoN8B72DcmP | |
17745 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoN8B72DcmP |
17750 | phosphohydrolase | |||
23275 | LexA family transcriptional regulator | |||
23280 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.EcoN8B72ORF23280P |
23285 | PerC family transcriptional regulator | |||
25220 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoN8B72ORF25220P |
25225 | DEAD/DEAH box helicase | |||
25255 | N-acetylneuraminate epimerase | |||
25260 | R | Ecos1613ORF26795P (100% identity) | EcoN8B72ORF25260P | |
25265 | transposase | |||
25340 | 87 aa hypothetical protein | |||
25345 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.EcoN8B72ORF25345P |
25350 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | EcoN8B72ORF25345P |
25355 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.EcoN8B72ORF25345P |
25360 | DUF4102 domain-containing protein | |||
plasmid pN8B7-1 | ||||
28875 | 101 aa hypothetical protein | |||
28880 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoN8B72ORF28880P | |
28885 | 73 aa hypothetical protein |